Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1815 ATGGCCGAAATGAAATTGATTCCAGGGTTTCGCTTTCATCCAACCGACGTTGAACTGGTTCAGTACTTTCTGAAGAGGAAGGTGTTGGGGAAAAAATTCCCTTCTAATGTTATTGCTGAAATTGACATATATAAGTATCCACCGTCGGATCTACCAGCTCATTCTTTACTTAAAAATGGAGATTTGGAATGGTTCTTCTTTTGCGCTCGAGGGAAGAAATATGGTAGTGGAGCTAGGATGAATAGGGCAACCGAAGGTGGTTTTTGGAAGACTACTGGGAAGGATAAACCGATTGAACACAAGAAGCATGTTGTGGGGATGAGAAAAACCCTGGTGTTTCACATTGGCAAAGCGCCCAAGGGAGTACGAACTAATTGGGTTATGTATGAATTCCGACTTGAAGATAAGGATCTCTCTGACAAAGGCATTCCACAGGACTCCTATGTGATCTGTAAGGTATTCCAAAAGGATGGTCCTGGTCCTAGGAATGGTGCACAATATGGAAAACCATTTAATGAGGAGGACTGGGATGATGATGAGGAGGAAATTGATATAGCATCTGCCCATGTTGATGTATCTGTGTCGGCTCCCATTCAACCTACCGTATGTCATAGTTCTGTTGTAAATGACATGCATCCTGCTTCTGGTGAATGCCCTGGGTCGACCTCTGTATCATGTCTATCAGGGTCAATTCCTTCTTGCTCAACACATCTTCCAGCGGCAAGCGATCAAGTTGAAGATGACATTGTAGGAATGCTTGATTCTTTCAAAGAAGATAACACACTGGCTCTGGATGAAGACAACATAGTTGAGAATGTTGATAGTCCTGCTCATGCAAATAAGATCTATGATGGCTTGGAGGACCTTGACAATTTGGGCGAATGGGGTGAAGGTGGACATGGTTACCAGAATGGTGAGTATACTCCAAATCAAATGCTTTCAACCGGTGATGACTTGTGGACGCCCGTTCCAGACTTCATGGAATTGAATGACCTTGATACGCCATTGTTCTGGGAGAATCAGAAGGATAAGTGA 1035 0.4348 MAEMKLIPGFRFHPTDVELVQYFLKRKVLGKKFPSNVIAEIDIYKYPPSDLPAHSLLKNGDLEWFFFCARGKKYGSGARMNRATEGGFWKTTGKDKPIEHKKHVVGMRKTLVFHIGKAPKGVRTNWVMYEFRLEDKDLSDKGIPQDSYVICKVFQKDGPGPRNGAQYGKPFNEEDWDDDEEEIDIASAHVDVSVSAPIQPTVCHSSVVNDMHPASGECPGSTSVSCLSGSIPSCSTHLPAASDQVEDDIVGMLDSFKEDNTLALDEDNIVENVDSPAHANKIYDGLEDLDNLGEWGEGGHGYQNGEYTPNQMLSTGDDLWTPVPDFMELNDLDTPLFWENQKDK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1815 344 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Dod09g1815 344 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Dod09g1815 344 PANTHER PLANT NAC DOMAIN PROTEIN 246 330 - -
Dod09g1815 344 PANTHER PLANT NAC DOMAIN PROTEIN 1 236 - -
Dod09g1815 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 246 330 - -
Dod09g1815 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 236 - -
Dod09g1815 344 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Dod09g1815 344 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1815 Dod-Chr9 39786128 39789997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1815 1 292 NAC Transcription Factor Family AT5G09330 45.597 5.99e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g1815 NAM 5.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1815 - - adu:107470479 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1815 09 39786128 39789997 Dod09g1815 09 39786128 39789997 ECH
Dod04g2531 04 49152495 49155203 Dod09g1815 09 39786128 39789997 PCT