Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1812 ATGAATCGAGTTACCAATATTAGTGATGAGTCTGACAAGAAAGCGAGGCTTGCAATACTGGAAGTGGCGCACATGATGAGTGTCCCCATGTCCCTGAGGGCTGTCATCAACCTTAAGGTCCCTGAAGCCATCTGGCAAGGTGGTTCCAACGCTCCTCTCTCCGCCTCCCAAATTTTGGGTCGCATTCGTCCCAACGGTGGCGGCGACGCCGAGAACCTTGAGCGTATTCTTCGCTTGCTCACTAGCTATAACATCTTTGCTGAGCACCTCATCACCGGCACTACTGGTGGCGAAAGGAAGTACTCCCTCACCGACATTGGTAAAACTCTCGTTGACGATCACCAAGGTGTAACCCATGTGGCTGGCGACGCGTTTGAATCTGTTCCCAATGGGGATGCCATCTTCATGAAGTGGGTGCTTTTACAATGGACGGACGAGGAATGCAAGCTGGTGTTGCAGAATTGTTATAAGGCTCTTCCAGTGGATGGAAAAGTGATTGCTTGTGAGCCGATGCGGCCAGATGGCATAACGGAGTACAAAAGCAAACTATTGAATCTAGAGGAGGAGAAACTAAAGTTAATTGAGATTATGATGGATGGGATTCGGTACACAATTTTATGA 621 0.4879 MNRVTNISDESDKKARLAILEVAHMMSVPMSLRAVINLKVPEAIWQGGSNAPLSASQILGRIRPNGGGDAENLERILRLLTSYNIFAEHLITGTTGGERKYSLTDIGKTLVDDHQGVTHVAGDAFESVPNGDAIFMKWVLLQWTDEECKLVLQNCYKALPVDGKVIACEPMRPDGITEYKSKLLNLEEEKLKLIEIMMDGIRYTIL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1812 206 PANTHER OS02G0823400 PROTEIN 8 115 - -
Dod09g1812 206 PANTHER OS02G0823400 PROTEIN 114 176 - -
Dod09g1812 206 Pfam Dimerisation domain 30 81 IPR012967 GO:0046983
Dod09g1812 206 Gene3D - 3 116 IPR036388 -
Dod09g1812 206 SUPERFAMILY "Winged helix" DNA-binding domain 10 113 IPR036390 -
Dod09g1812 206 Coils Coil 176 196 - -
Dod09g1812 206 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 206 IPR016461 GO:0008168
Dod09g1812 206 Pfam O-methyltransferase domain 113 181 IPR001077 GO:0008171
Dod09g1812 206 Gene3D Vaccinia Virus protein VP39 117 174 IPR029063 -
Dod09g1812 206 PANTHER O-METHYLTRANSFERASE 8 115 IPR016461 GO:0008168
Dod09g1812 206 PANTHER O-METHYLTRANSFERASE 114 176 IPR016461 GO:0008168
Dod09g1812 206 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 181 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1812 Dod-Chr9 39671338 39690787 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1812 116 173 Monolignol Biosynthesis Gene Families AT3G53140 72.414 1.19e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1812 - - cit:102612727 151.369