Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1801 ATGACCAGAAAAGCCACTAAACCCACATTCATCGCCACCTTCCTCCCACCATTCCCACTCACCAGATCCACCCTCCTCATCCTATCCATGGCATCCGTCCTCTCTCTCACCCTCACGCTCTGCCTCATCCTCTCCCTCTCCATCTCCTCCGGCCAACGCCACCCCTCCCCCCACATCCAGCAAGCCTGCAAGGCCACACGCTTCCCTCAACAATGCCAATCCTCCCTCACCCTTTCCAACCCCACACCGCTCCAAATCATCCAATCCGCCATCTCACTCTCCTCCGCCAACCTCGGAACCGCCCAGTCCATGGTGACCTCCATCCTGGACTCCTCCGCAGCCAACCATTCCCGCGCCACCGCCGCCAAGTGCTGCCTCCAGGTCCTCCGCTACTCCCGCCACCGCACCTCCCTCGCCGCCGCTGCCCTCCCCCGCGGCGCCCTCAAGGACGCCCGCTCCTGGATGAGCGCCGCGCTCACCTACCAGTACGGATGCTGGTCCGGGCTCAAGTACGCCAACGACACCGCACTCGTCGCCAAAACGATGTCGCTTCTCGACTCCCTCACCGCGATCACAAGCAACGCACTCAGCATGATCGTCTCCTATGACCTCTTCGGAAACGACACCGTTTCATGGAGGCCCCCGCTTACCGAGCGAGACGGCTTCTGGGAGCCAAACGCGTACGGGAGGGTTTGGGTACGGTCGCGGGAGGCGGTTAATGCGGCGCCGGATAATGTTAACGTTGGGGAAGGGAGGTTCGTGATATACATAAAGGAAGGGCTTTATGAGGAGAGGGTTAGGGTTCCGTTTAAGAAGAGGAATGTGGTGTTCTTGGGTGATGGAATGGGCAAGACTGTTATCACTGGTTCTGCCAATGTTGCGGGCCAACCGGGAATGACAACCTATAACTCCGCCACCGTCGGGGTTCTTGGGGATGGATTCATGGCGAAGGATCTCACCATCCAGAACACGGCAGGTGCTAATGCACACCAGGCGGTAGCCTTCAGGTCAGACAGTGATCTTTCTGTCATTGAGAATTGTGAATTCATTGGCAACCAAGACACTCTCTATGCTCATTCCCTGCGCCAATTTTATAAATCGTGCCGGATCATGGGCAATGTGGACTTCATCTTTGGAAACTCAGCTGCATTCTTCCAGGATTGCCAAATCTTAGTCCAGCCAAGGCAAGTCAGGCCGGAAAAGGGTGAGAAGAATGCCATCACGGCGCAGGGCAGGACGGACCCTGCTCAGTCCACAGGCTTTGTTTTCCAGAACTGCTTGATTAATGGCACTGAGGAATATATGGCATTGTATTACAGCAAGCCTAAAGTACACAGGAACTATCTGGGTAGGCCATGGAAGGAGTATTCTAGAACAGTTTTCATTCATTCTGTCTTGGAAGCCCTTATCACACCAGAGGGTTGGATGCCATGGACTGGGGACTTTGCACTGCAGACTCTTTACTATGGGGAATTTGGGAACTCAGGACCTGGTTCTAATCTGACTCAGAGGGTGCCCTGGAGTAGTAAGGTCCCAGACGAGCATGTGTTAATGTATTCAGTGCAGAGTTTCATTCAAGGAAATGATTGGATTCCATCATCTCAGTGA 1608 0.5485 MTRKATKPTFIATFLPPFPLTRSTLLILSMASVLSLTLTLCLILSLSISSGQRHPSPHIQQACKATRFPQQCQSSLTLSNPTPLQIIQSAISLSSANLGTAQSMVTSILDSSAANHSRATAAKCCLQVLRYSRHRTSLAAAALPRGALKDARSWMSAALTYQYGCWSGLKYANDTALVAKTMSLLDSLTAITSNALSMIVSYDLFGNDTVSWRPPLTERDGFWEPNAYGRVWVRSREAVNAAPDNVNVGEGRFVIYIKEGLYEERVRVPFKKRNVVFLGDGMGKTVITGSANVAGQPGMTTYNSATVGVLGDGFMAKDLTIQNTAGANAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIMGNVDFIFGNSAAFFQDCQILVQPRQVRPEKGEKNAITAQGRTDPAQSTGFVFQNCLINGTEEYMALYYSKPKVHRNYLGRPWKEYSRTVFIHSVLEALITPEGWMPWTGDFALQTLYYGEFGNSGPGSNLTQRVPWSSKVPDEHVLMYSVQSFIQGNDWIPSSQ* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1801 535 PANTHER PECTINESTERASE 40 227 - -
Dod09g1801 535 CDD PMEI-like_3 62 199 - -
Dod09g1801 535 Gene3D - 236 535 IPR012334 -
Dod09g1801 535 PANTHER PECTINESTERASE 235 533 - -
Dod09g1801 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 199 IPR035513 -
Dod09g1801 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 201 IPR035513 -
Dod09g1801 535 Pfam Plant invertase/pectin methylesterase inhibitor 59 198 IPR006501 GO:0004857
Dod09g1801 535 SUPERFAMILY Pectin lyase-like 237 533 IPR011050 -
Dod09g1801 535 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 198 IPR006501 GO:0004857
Dod09g1801 535 Pfam Pectinesterase 236 528 IPR000070 GO:0030599|GO:0042545
Dod09g1801 535 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 40 227 - -
Dod09g1801 535 SMART PMEI_2 54 198 IPR006501 GO:0004857
Dod09g1801 535 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 235 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1801 Dod-Chr9 39603826 39605986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1801 58 530 Carbohydrate Esterase AT5G09760 63.834 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1801 - - gmx:100802102 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1801 09 39603826 39605986 Dod09g1801 09 39603826 39605986 ECH
Dod04g2522 04 49048612 49051966 Dod09g1801 09 39603826 39605986 PCT