Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1798 ATGACATTTATTGCTGAATACACTGGCGATGTGGATTACATTAAGAATCGAGAACGTGATGATGGTGACAGTATGATGACCCTTCTTCTATCAACAAATCCTCTTCAAAGTCTTGTCATCTGTGCTGATAAACGTGGAAACATCGCTCGCTTTATTAATGGTATCAACAACCATACTCCGGAAGGTAGGAAGAAGCAGAACTGTAAATGTGTGAGATACAGTGTTAATGGTGAATGCAGGGTCTTCTTGGTTGCTACTCGTGATATTTCTAAGGGCGAGAGGCTTTATTATGATTATAATGGTTATGAGCATGAATATCCTACTCATCATTTTGTCTGA 339 0.3894 MTFIAEYTGDVDYIKNRERDDGDSMMTLLLSTNPLQSLVICADKRGNIARFINGINNHTPEGRKKQNCKCVRYSVNGECRVFLVATRDISKGERLYYDYNGYEHEYPTHHFV* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1798 112 Gene3D SET domain 1 112 IPR046341 -
Dod09g1798 112 Pfam SET domain 17 100 IPR001214 GO:0005515
Dod09g1798 112 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR5 1 110 - -
Dod09g1798 112 ProSiteProfiles SET domain profile. 1 100 IPR001214 GO:0005515
Dod09g1798 112 SUPERFAMILY SET domain 2 100 IPR046341 -
Dod09g1798 112 PANTHER HISTONE ACETYLTRANSFERASE 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1798 Dod-Chr9 39587882 39588433 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod09g1798 SET 4.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1798 K24406 - qsu:112038577 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1798 09 39587882 39588433 Dod09g1798 09 39587882 39588433 ECH