Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1790 ATGAGTATGGTGGGTTCAGAAAGCTCAGAAGAGGAGGGTACAGGGCAACCAGAGCCTCCCGATCCTGATGTCCTTGAAATTGATCCTACTGGTCGCTACATTAGGTACAGAGGAGTGCTCGGCAAAGGAGCTTTCAAGACTGTTTACAAGGCATTTGATGAAGCCAGTGGACTTGAAGTTGCGTGGAGCCAGGTTTGGATTGATCAAGTATTACAGTCACCAGGTGACTTAGAGAGGCTGTATTCGGAGGTGCATCTCTTGAATTCAATCAAACACAATAACATAGTCAGGCTCTACAATTCTTGGATTGATGACAAACACAGGACTGTTAACATGATTACAGAGCTTTTCACCTCGGGGAGCCTCAGACAGTATCGTAAGAAACACAAGAAGTTCAGCATGAAGGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAAACTACCTCCATAGTCACAAGCCCCCAATTTTACATAGGGACCTGAAGTGTGATAACATATTTATAAATGGTCACCAAGGGGAAGTTAAAATCGGAGATCTGGGGCTGGCAACTCTCTTGGAAGAGAGTAATGCCAAGAGCGTAATTGGTATGTTCTTTCATGCCCATGTATTTTTTAGTTCTTGTTAA 633 0.4344 MSMVGSESSEEEGTGQPEPPDPDVLEIDPTGRYIRYRGVLGKGAFKTVYKAFDEASGLEVAWSQVWIDQVLQSPGDLERLYSEVHLLNSIKHNNIVRLYNSWIDDKHRTVNMITELFTSGSLRQYRKKHKKFSMKAVKGWARQILMGLNYLHSHKPPILHRDLKCDNIFINGHQGEVKIGDLGLATLLEESNAKSVIGMFFHAHVFFSSC* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1790 210 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 7 198 - -
Dod09g1790 210 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Dod09g1790 210 ProSiteProfiles Protein kinase domain profile. 34 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1790 210 Pfam Protein kinase domain 38 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1790 210 Gene3D Transferase(Phosphotransferase) domain 1 117 204 - -
Dod09g1790 210 SMART serkin_6 34 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1790 210 MobiDBLite consensus disorder prediction 1 26 - -
Dod09g1790 210 SUPERFAMILY Protein kinase-like (PK-like) 30 198 IPR011009 -
Dod09g1790 210 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 198 - -
Dod09g1790 210 Gene3D Phosphorylase Kinase; domain 1 20 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1790 Dod-Chr9 39509427 39510471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1790 11 201 MAP Kinase Kinase Kinase AT3G18750 74.869 5.38e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod09g1790 Pkinase 2.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1790 K08867 - tcc:18611790 319.701