Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1787 ATGGAATGTGAAGGCACCAAATTGGTAAGAGACGACCTCGTTTTGAAGTGCAAAATCGGAGAGGGTTCATTCTCGGCGGTGTGGAGGGCGGAGCACCGTGGGAGCGGCCAAGAGGTGGCGGTGAAGCAGGTCTTCCTCTCCAAACTCAGCCCTCGCCTCAAGGCCTCCTTCGACTGCGAGATCAATTTCTTGTCCTCTGTCATCCACCCCAACATCGTTCGACTCCTTCATTTCTTCCAGGCTGATGGATATGCTTACCTGGTGATGGAGTATTGCGCTGGAGGGAATCTTGCTTCTTATATTCGATGCCATGGGAGAGTTCAACAGCAAACCGCCAGAAAATTCATGCAGCAGCTTGGTTCTGGTCTGAAAATATTACACACTCACGGAATCATTCACAGAGACTTGAAACCAGAGAACATTTTGCTATCAAGCCGTGGGGCTGATGCAGTGCTAAAGATAGCTGATTTTGGCCTCTCAAGAACTGTACGCCCGGGTGAGTATGCTGAGACAGTATGTGGTTCCCCATTATACATGGCTCCTGAAGTGCTTCAGTTCCAGAGATATGATGGCAAGGTGGACATGTGGAGTGTCGGGGCTATTCTTTTTGAACTTCTAAATGGCTACCCCCCTTTTGATGGCAGAAATAATGTTCAGCTGTTGAAAAATATGAGATCCTGTACCTGTCTTCCATTTTCTGAGATGATTCTTTCAGGATTGGATCCTGATTGTCTTGATATTTGTTCAAGGCTACTATGCTTGAATCCAGTGGATCGCCTATCTTTTGATGAATTTTATTGGCATACGTTTCTACGTAGAAAATTGTTGGGAAGTTGA 837 0.4648 MECEGTKLVRDDLVLKCKIGEGSFSAVWRAEHRGSGQEVAVKQVFLSKLSPRLKASFDCEINFLSSVIHPNIVRLLHFFQADGYAYLVMEYCAGGNLASYIRCHGRVQQQTARKFMQQLGSGLKILHTHGIIHRDLKPENILLSSRGADAVLKIADFGLSRTVRPGEYAETVCGSPLYMAPEVLQFQRYDGKVDMWSVGAILFELLNGYPPFDGRNNVQLLKNMRSCTCLPFSEMILSGLDPDCLDICSRLLCLNPVDRLSFDEFYWHTFLRRKLLGS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1787 278 SMART serkin_6 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1787 278 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1787 278 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 18 267 IPR045269 GO:0004674|GO:0006914
Dod09g1787 278 Gene3D Transferase(Phosphotransferase) domain 1 6 276 - -
Dod09g1787 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Dod09g1787 278 SUPERFAMILY Protein kinase-like (PK-like) 7 273 IPR011009 -
Dod09g1787 278 ProSiteProfiles Protein kinase domain profile. 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1787 278 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 18 267 - -
Dod09g1787 278 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1787 Dod-Chr9 39497183 39499965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1787 19 265 CBL-interacting serine-threonine protein kinases AT2G30360 38.189 1.83e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Dod09g1787 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1787 - - lja:Lj1g3v1289070.2 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1787 09 39497183 39499965 Dod09g1787 09 39497183 39499965 ECH