Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1786 ATGTACGCTTCAACTTCCTTTGCTTCACCCCTCATCCATGACCTTCTTGAGGACTTCAGTTCAAGAAGGTTACTCCTTCACACCCCACTTAACCAATCACCCAACCCAGCCAACCCCCCAGCTTCCACAAACACACACAACTCATCAGAACCATATCTTGGAGATGGTAACTTCGATGCAAATGTTGTTATGGTACTCTCAGTACTGTTGTGTGCTCTTATCTGCTCACTGGGGTTGAACTCCATCATAAGGTGTGCATTAAGGTGTTCCAGTTTAGTGATCAGTGACTCATCTAGCAACCCTCCAGCTAGAGTGGTCAACACAGGAGTCAAGAAGAAAGCCCTAAAGACTTTTCCCACACTGGAATTAGCCTTGTGCCTCGAGTTAGTACTAGAGTGTGGTCTTCAGTTCTGGTTAGCCACCCAATCAACCATAATCAATGCAGTGATAATGGATGAATTGTGTATAGTGTTGTAA 477 0.4486 MYASTSFASPLIHDLLEDFSSRRLLLHTPLNQSPNPANPPASTNTHNSSEPYLGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSSLVISDSSSNPPARVVNTGVKKKALKTFPTLELALCLELVLECGLQFWLATQSTIINAVIMDELCIVL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1786 158 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 127 - -
Dod09g1786 158 PANTHER RING-H2 FINGER PROTEIN ATL78 1 127 IPR044602 GO:0016567|GO:0016740
Dod09g1786 158 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1786 Dod-Chr9 39492266 39493127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1786 47 144 C3H Transcription Factor Family AT1G76410 32.558 6.08e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1786 K19040 - vvi:100243666 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2510 04 48895759 48896698 Dod09g1786 09 39492266 39493127 PCT