Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1784 ATGGCAGATGGTGAGGATATTCAACCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAGGCAGGATTTGCTGGTGATGATGCTCCTAGGGCTGTGTTTCCCAGTATTGTTGGCAGACCACGCCATACTGGTGTTATGGTTGGGATGGGTCAAAAGGATGCCTATGTAGGTGATGAAGCCCAATCTAAAAGAGGTATTCTTACTTTGAAGTACCCCATTGAGCATGGTATAGTCAGCAACTGGGATGACATGGAAAAGATCTGGCATCACACATTTTACAATGAATTGCGTGTTGCTCCTGAGGAGCACCCAGTGCTTCTAACCGAGGCTCCTCTCAACCCAAAAGCCAACAGAGAAAAGATGACCCAAATCATGTTTGAGACCTTCAACGTGCCTGCCATGTATGTGGCCATCCAGGCTGTCCTCTCCCTATATGCAAGTGGTCGCACAACTGGTATTGTCTTGGACTCTGGTGATGGTGTGAGTCACACTGTGCCAATCTATGAGGGGTATGCACTACCACATGCCATCCTTCGATTGGATCTTGCAGGCCGTGACCTAACTGATTCTTTGATGAAGATCCTCACTGAGAGAGGATACATGTTCACCACCTCAGCTGAGCGGGAAATTGTCCGTGACATAAAGGAGAAGCTTGCATACGTTGCCTTAGATTATGAGCAAGAACTTGAGACTGCAAAGAGCAGTTCTTCAATTGAGAAAAACTATGAGCTTCCAGATGGACAAGTTATCACAATTGGAGCTGAGAGATTCCGTTGCCCAGAAGTTCTTTTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGAATTCATGAGACCACCTACAACTCTATCATGAAGTGTGATGTGGATATCAGAAAAGATCTGTATGGCAACATTGTTCTTAGTGGTGGCTCAACTATGTTCCCTGGTATTGCTGACCGAATGAGCAAGGAGATCACTGCCCTTGCTCCTAGCAGCATGAAGATTAAGGTTGTGGCTCCACCAGAGAGAAAGTACAGTGTCTGGATAGGAGGGTCAATCCTTGCATCCCTCAGCACCTTCCAGCAGGTGATTGTTTTATCAATATTAGCCCTTCATGGTGCATGCCCTTTAGATTGA 1119 0.4647 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVIVLSILALHGACPLD* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1784 372 SUPERFAMILY Actin-like ATPase domain 149 358 IPR043129 -
Dod09g1784 372 Gene3D - 10 359 - -
Dod09g1784 372 PANTHER BNAC02G00690D PROTEIN 1 361 - -
Dod09g1784 372 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Dod09g1784 372 Gene3D - 140 340 - -
Dod09g1784 372 SMART actin_3 7 370 IPR004000 -
Dod09g1784 372 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Dod09g1784 372 PANTHER ACTIN 1 361 IPR004000 -
Dod09g1784 372 Gene3D Actin; Chain A, domain 4 182 273 - -
Dod09g1784 372 PRINTS Actin signature 51 62 IPR004000 -
Dod09g1784 372 PRINTS Actin signature 238 254 IPR004000 -
Dod09g1784 372 PRINTS Actin signature 63 85 IPR004000 -
Dod09g1784 372 PRINTS Actin signature 142 161 IPR004000 -
Dod09g1784 372 PRINTS Actin signature 117 130 IPR004000 -
Dod09g1784 372 PRINTS Actin signature 28 37 IPR004000 -
Dod09g1784 372 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Dod09g1784 372 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Dod09g1784 372 Pfam Actin 5 359 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1784 Dod-Chr9 39478872 39480164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1784 1 359 Cytoskeleton Gene Families AT5G09810 98.050 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1784 K10355 - sly:101264601 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1784 09 39478872 39480164 Dod09g1784 09 39478872 39480164 ECH