Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1781 ATGCTGGAAAACTCAACTCTACCGGAAAATCCCGTGGAGAACACCACGCAGGCGGTAAGGGACGGTGGCGACCCGGTGCCCGATGGGCCGAAAGGGGAGCAGCAGGGAGAAGAGGGTGACCGGAATACCGGCGCCAACCGGTGGCCTCGCGAGGAGACAATGGCCTTGCTGAAGATAAGGTCAGACATGGACGCTGCTTTCAGGGATATCAGCCCAAAAGCCCCTCTTTGGGAACAAGTCTCAAGGAAATTAGCGGAGTTGGGGTATGATCGAAGTGCGAAGAAGTGCAAGGAGAAGTTTGAGAACATTCACAAGTACTATAGGCGGACCAAGGAAGGCCGTAGTGGAAAGCCAAACGGAAAGACTTACCGGTTTTTCGAGCAACTAGAAGCGTTAAACCCACACACGATTCCTTCCTCCGCCGGGATTACCACCAATAGCAGCAGCAGCAACAACAACAACAACAACCAATCTTATTCCCAACAACAACAGCAGCAGCAGCAACGTCGTTCATCCACTACTTCCTCTTCCAGCAAAGGGGCTGGGGAAGAAGGGAAGAAGAATAAGAAGAGGAGGCTCACGGAGTTCTTCGAGGGTTTGATGAGGGAGGTCATAGAGAAGCAAGAGACCCTTCAGAGGAAGTTCATGGAGGTGTTGGAGAAATGCGAGCAGGATCGAATGGCCAGGGAGCAAGCCTGGAAGACTGAAGAATTGGCTCGGATTAAGAGGGAAAGGGAGCTTCTTGCTCAAGAAAGGTCTATTGCTGCGGCAAAGGATGAAGCTGTTCTTGCCTTTCTCAAGAAGTTCGCAGAGAACAATGGCACGATGCTGCACTTGCCAGAGAAAACGCAGGTTCCTATTATTCCACCTGACAAGGACAAAGAGAAAGACAAGGGCATGCAGCAAGATGTTAACAGTGGAGGCAGTGTGGTGGATATGGATAAGGATAAGCATCAAGAGTGTGGGAATGTTATTAGTGTTGGGAATTTCGTGCACATGAGCTCTTCGAGGTGGCCCAAGGATGAAGTGGAGGCTTTGATTCGGTTGAGGACACAGCTTGATGTGCAGCAGCAGCAGCAGCTAGGGAATAATGGTGGGTCTAATAAGGGTCCTCTTTGGGAGGAGATATCTTTGGCAATGAAGGGACTTGGGTACGATAGAAGTGCCAAGAGGTGCAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAGGATGAAGGAGAAGAACAAGAGGAAGCCCGAGGATTCAAAAACCTGTCCCTATTACCACCACCTTGAAGCTTTGTACAGCAAAAAGCCTAAGAATAATAATAATAATAATAAGGTGGATGAATCGGGTGGTTCTGGGAGCGAGTTGAAGCCCGAGGAGCTATTGTTGCACATCATGAGTAGTAGTGGTCAAGATCAAGAAGAGAGGCAACAACAACAACAGATAGAGTCTTCTTCTGAAGACGCGGACAGAGAAGATAACAGGGATAAGAATCTGCAGGAGGGAGGAGAAAATGAAGATGGGTATCAACAGATGGTGGAGAATAGTCCCTCCATAGCAATCATGGGTTGA 1563 0.4894 MLENSTLPENPVENTTQAVRDGGDPVPDGPKGEQQGEEGDRNTGANRWPREETMALLKIRSDMDAAFRDISPKAPLWEQVSRKLAELGYDRSAKKCKEKFENIHKYYRRTKEGRSGKPNGKTYRFFEQLEALNPHTIPSSAGITTNSSSSNNNNNNQSYSQQQQQQQQRRSSTTSSSSKGAGEEGKKNKKRRLTEFFEGLMREVIEKQETLQRKFMEVLEKCEQDRMAREQAWKTEELARIKRERELLAQERSIAAAKDEAVLAFLKKFAENNGTMLHLPEKTQVPIIPPDKDKEKDKGMQQDVNSGGSVVDMDKDKHQECGNVISVGNFVHMSSSRWPKDEVEALIRLRTQLDVQQQQQLGNNGGSNKGPLWEEISLAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPEDSKTCPYYHHLEALYSKKPKNNNNNNKVDESGGSGSELKPEELLLHIMSSSGQDQEERQQQQQIESSSEDADREDNRDKNLQEGGENEDGYQQMVENSPSIAIMG* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1781 520 Gene3D - 338 405 - -
Dod09g1781 520 Gene3D - 48 109 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 432 447 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 285 313 - -
Dod09g1781 520 SMART sant 44 106 IPR001005 -
Dod09g1781 520 SMART sant 334 402 IPR001005 -
Dod09g1781 520 MobiDBLite consensus disorder prediction 287 301 - -
Dod09g1781 520 ProSiteProfiles Myb-like domain profile. 336 400 IPR001005 -
Dod09g1781 520 MobiDBLite consensus disorder prediction 1 50 - -
Dod09g1781 520 PANTHER - 1 519 - -
Dod09g1781 520 CDD GT1 46 111 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 136 190 - -
Dod09g1781 520 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 1 519 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 31 50 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 463 481 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 428 520 - -
Dod09g1781 520 ProSiteProfiles Myb-like domain profile. 40 104 IPR001005 -
Dod09g1781 520 CDD GT1 336 407 - -
Dod09g1781 520 Pfam Myb/SANT-like DNA-binding domain 46 132 IPR044822 -
Dod09g1781 520 Pfam Myb/SANT-like DNA-binding domain 336 429 IPR044822 -
Dod09g1781 520 MobiDBLite consensus disorder prediction 1 17 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 136 181 - -
Dod09g1781 520 MobiDBLite consensus disorder prediction 482 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1781 Dod-Chr9 39455645 39457596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1781 37 435 Trihelix Transcription Factor Family AT1G76880 45.098 3.60e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod09g1781 Myb_DNA-bind_4 1.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1781 - - pvu:PHAVU_009G147500g 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1781 09 39455645 39457596 Dod09g1781 09 39455645 39457596 ECH