Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1776 ATGAGGCCCCTTCTTCCCAAAAACCTCTTCTTTTTCTCGTCCTCCTCTTATTCGCCATTTCCATCATTACCAGCTCCTCGTGCTCTGCTTCTTCGGTTGCAAGTGTGTTACTTGTCGGCGTCGCCCGGTTACGGGACACTGCCGCATTCTCCGCACTACTCGAGGCGGTTGGAGGAGGAGTCGCGGAACGTGAGGGTGTCGGTGTGGTGGGATTTCGAGAACTGCCACCCGCCCTCGGGGGTCAACATCTCGAGGGTCGCCCCGACCATAACGGAGGCGGTGAGGACAAACGGGATAAAGGGGCCAATTCACATAACGGCATTCGGCGATGTGTTGCAGCTCTCCAGGGCCAACCAGGAGACCCTTGCTTGCACCGGCATTCATCTCACCCACGTTCCCAATGGTGGAAAGAATAGTGCTGATCGATCTCTTCTTGTTGATCTTATGTATTGGGTTTCACAAAATCCTCCACCAGCACATGTCTTTCTAATTTCTGGTGATAGAGATTTCGCTGGCGTATTGCACCGGTTAAGAATGAATAATTACAATATCTTGCTTGCGATTCCAGGAAGGGCTCCTGATGTGCTCCGCAGTGCAGCAACTATAATGTGGCAATGGCCTTCTCTGCTTAAGGGAGAAGACCTTATTGGAAAGCATTTCAACCATCCTCCTGATGGCCCCTATGGTTCATGGTATGGAAACTATAAGATGCCTCTTGAAAATCCCTTCTCAGCTAGTGAGCAGTCTGCACCTGTACAAAATGTGGAAATATGTGAACCTACCCCAGACCCACCAGTTGCAGTTCCAAAGTCAGTTGTAAGGCAGGTTAGGCATATATTGAGTTCACATCCAAAAGGGATCTCCATTACAGATCTTCGTGCAGAGTTGGCAAAATGTAATGTTCATTTGGATAAATCCTTATATGGATTTAAAAAGTTTTCCCTCTTTATTTCATCAATGCCACACATACAGCTCAAGCCTATAGGTGAAGGTAATTTTTGTGTATGTTTGATCCCCTCTGAGTCTTCTAAACCGTTTGCGAGCAATGATGGGCTGTCAATGGCATCTGCTGTTAAGAATGAGGAGAGAGGTACACCAAAGAAAAACAAAAAAGAGAATGAGGAGAGGGGTACACCAAAAAAAAACAAAAAAGAGAATGAGGAGAGGGGTCATGCAACAGCTCCAAAGCTAAACGCTGAGGGTAAAACTGTGGCTAGTGATGCAGATGGGACACCTTCAATGGCCTCATTGCATGAAAGGAGTAGTGAGAAGGTTGGGGATGTGGCTGACGCACGATTGTCTGAGACTCAACTGCCATCCGAGGATAATGAAGTTTCTAAATCTAAGGTGGATTTCTTAAAAATGAGCTCTAAAAGATTGCCCGATAGTGATATTGTTGGGCCAAAGGATGCAAGTCCTAATATTTCAGGAAAATATACAACATCAGAGAAGCACTCTGCTGGAAATGATTACATGAGGGTCGAAAACGATTGTATCGAAAATGATGAATCTGCAAAATTTATAGCTGAGGACAAATATGAGAGGCCAACTAGAAAGGATGCTGATGAAATTTGTCACAACCCGTATTCTTTGCCGGTTGGTGATTCTGTGGTTGACAAAAGACCTGGCAGAAGTGCTGAAACTCATAACAAAAGTCCTACTTTCTTTGGTTGGATTAGAAGTTGGTGGCCATTTTGGAAAAGCAGTGCAAAGTCAGATGATTTGAATAGTCATTCCAAGGAGCCCAAGTTATCTGAAGTGGACCAGACTGTCAGTAATGCTGGAGAGCCCAAATTATCAGATGAGGACCCCAAGTCATCTGAACTGAACCAGACTGTTAGTCGTGCTGAAGAGCCAAAGTTATCTGATGAGGAGCCGAAGTTATCTCAACTGGATGGGACTGTTGTTCATTCTGTTGAGACCAAATTATCTAAACCAGACCAGGCTGTTGGTCATCCTGTAGAGCTCAAGTTGTCAAAAGTGGACAAGAATGTTGATCGTCTTGAAAAGCCTGAGTTATTTTCTAGAGGTTCCTTTTGGAATGACATGGAATCTTTTGTTTTCACCCCCAAAGGATCACTTCTCTTCTCCCTGTCTACAAGCAGGGAGGATTTGGCTCATAAATTACTTAAGGATGGACCCCTGTTTCTCAGATCTCTCACTGCAAAGGATATCCTTCAACTGGTGGACTTATTAATAACAGATAAAAAATGGTTGGAGGAAAGCCCTTCCCAAGCATATCCTTTTAGGGTAACTCTATCTGTTCAGAAGAGCTCATTGATGGGCCTATCTCATGGTGCCAATGGCTTGAGATCTCTGTTTTTAAGTAGAACATCAGAGTCCAGCTCCAGCTCACAGGAATCATTTGAACATGTAGAGAAACACAATCAGAATATCCCTGATACTAGAGTTTTCACACCTGCCACTGAAACAAAATATGCTCAGAGGTCTAGAAATGATATATTAGTAGACTGTCAGAAACTTGTGAATGAAATATTGAGGGAACACCCAGACGGATACAATATTGGTTGTTTCCGAAAACTATTTATTGAGAGGTATGGCTATCATCTTGAAATACAGAAGCTTGGTTATAGAAAGTTGGCATCCTTTTTACAGACAATGCCTGGAGCTAAAGTAGAGTCAAGTCATATTTTCCCGTCAGTTCCTGCTGTTAGTGATTCTGATCAGGAAAGTTCAATCCTCAAAACTCAAGAAACTGATGGTAGTCATGCTGTCTCCAACTCAGATTCTGAATTTTCTGATTCCGCTTCAAAAGATGATAGCATTGACTCTCCATGGGAGGAGTTAGGTCCTGTTTCTGCCAACAATTCCGATCAGAGGGATCTAGAGTCACTATTAAGTCCGGAAGCCAAAGAACTGAGGTATCCAGATTATGAACCCATTGGCTCAGATTATGATTCTTCTGAAACTGAAGGAGATAGTTCCTGTTTAACTCAACCGGAAGTGCAAGGAAAGCCAAAATTTAATGAACAAGAAAGTTCTTTTTGGCAAGCTCTGGATTTGTGGCACAGCAGTAAGGAAGGTGAGAATAGTTTCAAGAAGTCAGACAGCATTGACATCTTAGGCGATTCTCTGACTGATATTTTAAACTCATCGCCGGAGCCGACTCAGGGTGCCCTTTCCAAAATTCCTTCAGGGAGCTACAGAGAGAAGCAAAGATATCAAAAGAACTATTCATTTGTTGCTGACCCACTCTTACCGGAGAAGGACAAGCTAATTGACGGCATATTAGATGGCTTTAAGAAAGCACAAGGGCCTAAGATGCAAAACTGA 3294 0.4359 MRPLLPKNLFFFSSSSYSPFPSLPAPRALLLRLQVCYLSASPGYGTLPHSPHYSRRLEEESRNVRVSVWWDFENCHPPSGVNISRVAPTITEAVRTNGIKGPIHITAFGDVLQLSRANQETLACTGIHLTHVPNGGKNSADRSLLVDLMYWVSQNPPPAHVFLISGDRDFAGVLHRLRMNNYNILLAIPGRAPDVLRSAATIMWQWPSLLKGEDLIGKHFNHPPDGPYGSWYGNYKMPLENPFSASEQSAPVQNVEICEPTPDPPVAVPKSVVRQVRHILSSHPKGISITDLRAELAKCNVHLDKSLYGFKKFSLFISSMPHIQLKPIGEGNFCVCLIPSESSKPFASNDGLSMASAVKNEERGTPKKNKKENEERGTPKKNKKENEERGHATAPKLNAEGKTVASDADGTPSMASLHERSSEKVGDVADARLSETQLPSEDNEVSKSKVDFLKMSSKRLPDSDIVGPKDASPNISGKYTTSEKHSAGNDYMRVENDCIENDESAKFIAEDKYERPTRKDADEICHNPYSLPVGDSVVDKRPGRSAETHNKSPTFFGWIRSWWPFWKSSAKSDDLNSHSKEPKLSEVDQTVSNAGEPKLSDEDPKSSELNQTVSRAEEPKLSDEEPKLSQLDGTVVHSVETKLSKPDQAVGHPVELKLSKVDKNVDRLEKPELFSRGSFWNDMESFVFTPKGSLLFSLSTSREDLAHKLLKDGPLFLRSLTAKDILQLVDLLITDKKWLEESPSQAYPFRVTLSVQKSSLMGLSHGANGLRSLFLSRTSESSSSSQESFEHVEKHNQNIPDTRVFTPATETKYAQRSRNDILVDCQKLVNEILREHPDGYNIGCFRKLFIERYGYHLEIQKLGYRKLASFLQTMPGAKVESSHIFPSVPAVSDSDQESSILKTQETDGSHAVSNSDSEFSDSASKDDSIDSPWEELGPVSANNSDQRDLESLLSPEAKELRYPDYEPIGSDYDSSETEGDSSCLTQPEVQGKPKFNEQESSFWQALDLWHSSKEGENSFKKSDSIDILGDSLTDILNSSPEPTQGALSKIPSGSYREKQRYQKNYSFVADPLLPEKDKLIDGILDGFKKAQGPKMQN* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1776 1097 MobiDBLite consensus disorder prediction 951 966 - -
Dod09g1776 1097 Gene3D - 57 206 - -
Dod09g1776 1097 CDD LOTUS 269 337 - -
Dod09g1776 1097 MobiDBLite consensus disorder prediction 888 919 - -
Dod09g1776 1097 MobiDBLite consensus disorder prediction 974 993 - -
Dod09g1776 1097 MobiDBLite consensus disorder prediction 888 993 - -
Dod09g1776 1097 ProSiteProfiles OST-type HTH domain profile. 821 895 IPR025605 -
Dod09g1776 1097 PANTHER LIMKAIN B LKAP 39 1034 IPR024768 GO:0005777|GO:0010468|GO:1903231
Dod09g1776 1097 MobiDBLite consensus disorder prediction 573 629 - -
Dod09g1776 1097 Gene3D - 267 344 IPR041966 -
Dod09g1776 1097 MobiDBLite consensus disorder prediction 460 488 - -
Dod09g1776 1097 Pfam NYN domain 65 200 IPR021139 GO:0004540
Dod09g1776 1097 MobiDBLite consensus disorder prediction 357 426 - -
Dod09g1776 1097 CDD LOTUS 824 876 - -
Dod09g1776 1097 PANTHER EMB|CAB71880.1 39 1034 - -
Dod09g1776 1097 MobiDBLite consensus disorder prediction 516 552 - -
Dod09g1776 1097 ProSiteProfiles OST-type HTH domain profile. 268 339 IPR025605 -
Dod09g1776 1097 Pfam OST-HTH/LOTUS domain 826 883 IPR025605 -
Dod09g1776 1097 Pfam OST-HTH/LOTUS domain 270 332 IPR025605 -
Dod09g1776 1097 Gene3D - 816 883 IPR041966 -
Dod09g1776 1097 MobiDBLite consensus disorder prediction 361 395 - -
Dod09g1776 1097 CDD PIN_limkain_b1_N_like 65 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1776 65 330 C2H2 Transcription Factor Family AT5G61190 33.935 1.43e-37 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1776 - - ahf:112782923 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1776 09 39412440 39416961 Dod09g1776 09 39412440 39416961 ECH