Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1759 ATGAAACTCCTTAAAACCCACAGCAGCTGTCTCTGTCTCTGTCCCTTGCTTTTCTTCTCCATCACCGTTCTCTTCTCCGCCGAAGCAGCAGCAGCAGCAGCAGCTTCACCATCGGCTCCGAGAGACCCGACCCAACAACTGATAAACTTCAAAGCCACTCTCCCGAACCCGAACGTCCTCCCGAACTGGCTCCCGAACCACAACCCATGCTCATTCAGGGGCATCACCTGCAAAAACCAGCAACAAATCACCTCCATAGACCTGAGCTCCGTCCCACTCACCACCAACCTCACCACCGTGACCAACTTCCTACTCACCCTCGACCACCTCGAGCATCTCTCCCTCAAATCCAGCAACCTCACAGGCCCCATTATTCACTCCCTAAACTTGTGCGGCGCCACCCTGACCACCATAGATCTGTCGCAGAACGCAATCTCCGGGTCCCTCGACGACATGTCGTTTCTCTCCTCCTGCTCATCCCTCCAGTCCCTTAACCTCTCCAGCAACCTCCTCGAGTTCCCACCCAACGGCTCCCCTAAATGGACCCTCAACAACCTCGAAGTCCTCGACCTCTCCTACAACAAGATTACCGGCCCCAACGTCCTCCCTTGGATCCTGTCCACCGGCTGCGACGGTCTCCTCCACCTCGCCCTCAAAGGAAACAAGCTCACAGGAGAAACCGACTTCTCCGGTTGCGGGAACCTCGAGCATTTGGACCTCTCATCCAACAACTTCTCCGTGGCCATCCCCTCCTTAGGCGAGTGCTCTTCCCTCGAGTACCTCGACCTCTCTGGGAACAAGTACTTCGGCGACATTGCCCGCACAATCTCCCCTTGCAAAATCCTCGTGTACCTCAACGTCTCCAGTAACCAGTTCTCCGGTCCGGTTCCCACCCTCCCCTCCGGTTCCCTGCAGTTCGTGTACCTCTCCGGTAACCACTTCGCTGGCCAGATTCCGTTAAGCATAACTGACCTCTGCTCAACTCTCATCGAGCTCGATCTATCCTCTAACAACCTCACGGGACCCGTGCCGCCCGAGTTCTCGGCGTGCTCGTCTCTCGAGTCGTTCGATATATCGGCCAACAAGTTCACGCGCGAGTTGCCGATTGATATTTTCGTCCAAATGAGGAGCCTGAAGGAGCTTTCTCTTTCGTTCAACCAGTTCGTTGGGAAGCTGCCCGAGTCGGTGTCGAAGCTGGTGGGTTTAGAATCGCTCGATCTGAGTTCCAACAACTTGACCGGGCCAATCCCGAAGGTGCTGTGTCAGGATCCAAGGAATCGTTTGAAGGAGCTCTATCTACAGAACAACGTGTTCACGGGTTCTATTCCCCCCACGCTCAGCAACTGTTCCAACCTCGTAGCATTGGATTTGAGCTTCAACTACCTCTGGGGCACTATCCCTTCGAGTTTAGGGTCGCTCTCGAATTTGAAAGACTTGATCATATGGTTGAACCAGCTGCACGGGGAGATACCCCAGGAGCTCGGGTACATCAAGACGCTGCAGAACCTGATCCTGGACTTCAACGACTTGAGCGGGGTCATTCCTTCTGGGCTAAGCAACTGCACCCAGTTGAATTGGATCTCTTTGTCAAACAACAGGCTCACAGGGGAGATTCCTCCCTGGATTGGCAAGCTCTCCAATTTGGCAATCTTGAAGCTCAGCAACAACTCCTTCTCCGGCAGCATTCCGCCGGAGCTAGGAGATTGCAACAGCCTGATTTGGCTGGATCTTAACACCAACATGCTCACCGGGCCGATTCCGCCGGAGCTCTTCAAGCAGTCGGGGAAAATCGCGGTGAATTTCATCAGCGGGAAGACTTACGTTTACATAAAGAACGATGGGAGCAAGGAGTGCCATGGTGCTGGGAACTTGCTGGAGTTCGCCGGGATCAGCCAGCTGCAGCTGAACAGGATTTCCACCAGGAATCCTTGCAACTTCACAAGGGTCTATGGAGGTAAGTTACAGCCCACGTTTAACCATAACGGTTCCATGATCTTTTTGGACATTTCGCACAACATGTTGTCTGGTACTATTCCGAAGGAGATTGGGACAATGTACTATCTCTACATTCTCAATTTGGGGCACAACAATATCTCTGGTAAGATCCCTGAAGAGCTTGGCAGCATGAAGAATCTCAACATTCTTGATCTCTCCTACAATAGGCTAGAAGGGCTGATTCCGCCGAGCTTGACGGGTCTTTCCCTGCTCACGGAAATTGATTTTTCCAACAATTTTCTTTCCGGGTTGATTCCGGAATCGGGTCAATTTGATACCTTTCCGGCTTATAGGTTTCAGAACAATTCTGGTCTGTGTGGAGTCCCTCTTCCACCATGTGGGCCGGACTCCGGAACTGGCGATGGTAACCAGAATGAGAAGTCCAATAACAAGAAACAGGCCTCTCTTGCAGGGAGTGTGGCCATGGGATTGTTGTTCTCCCTCTTCTGCGTCTTTGGTTTGATGATCATTGCCATTGAGACCAGGAAGAGGAGGAAGAAGAAGGAAGCTGTATTGGACGCCTATGTTGACGGTAATTCTAATTCCGGCAATGCCAATGGCAGCTGGAAACTGACCAGTGGCAAGGAAGCTCTCAGCATTAACCTTGCAACATTTGAGAAGCCCCTCAGGAAGCTTACTTTTGCGGATCTTCTTGAAGCTACCAATGGATTTCACAATGACAGTCTTATTGGGTCTGGAGGTTTTGGTGATGTGTACAAGGCTCAGTTGAAGGATGGAAGCGTTGTGGCCATAAAAAAACTGATACATGTTAGTGGACAAGGGGACAGGGAATTCACTGCTGAGATGGAAACCATTGGGAAGATCAAGCACAGGAACTTGGTTCCCCTTCTGGGGTACTGCAAGGTTGGAGAGGAAAGGCTCTTGGTTTATGAGTACATGAAATACGGAAGCCTTGAAGATGTTCTGCATGACCCGAAGAAAGCTGGGATCAAGCTGAATTGGGCAGTGAGGAGGAAGATTGCCATTGGGGCTGCAAGGGGATTGGCTTTCCTTCACCACAGTTGCTCCCCCCACATCATTCACAGGGACATGAAGTCAAGCAATGTGCTTCTTGATGAGAACTTGGAAGCTAGAGTCTCTGATTTTGGAATGGCTAGGCTCATGAATGCACTGGATACCCATTTGAGTGTGAGCACACTAGCAGGGACCCCAGGATATGTGCCTCCTGAATACTATCAGAGCTTCAGGTGCTCCACTAAAGGCGATGTCTATAGTTATGGTGTGGTTTTGTTGGAGCTGCTGACGGGGAAAAGGCCAACGGACTCGGCTGATTTTGGTGACAACAACCTTGTTGGGTGGGTGAAACAGCATGCCAAACTGAGGATAAGTGATGTTTTCGACCCGGAGCTGATGAAGGAAGAGCCGAGCCTAGAGATTGAGCTTCTGCAGCACTTGAAGGTCGCTTGTACTTGTTTGGATGACAGGGCTTGGAAGCGCCCGACAATGATGCAGGTCATGGCAATGTTCAAGGAAATCCAGGCAGGGTCAGGGGTTGATTCACAGTCTACAATAGCCACCGAAGATGAAGGTTTCCATGCTATTGAAATGATGGAGATGAGTATTAAAGAAGCCCCTGAATTGAGCAAGCCGTAG 3609 0.5129 MKLLKTHSSCLCLCPLLFFSITVLFSAEAAAAAAASPSAPRDPTQQLINFKATLPNPNVLPNWLPNHNPCSFRGITCKNQQQITSIDLSSVPLTTNLTTVTNFLLTLDHLEHLSLKSSNLTGPIIHSLNLCGATLTTIDLSQNAISGSLDDMSFLSSCSSLQSLNLSSNLLEFPPNGSPKWTLNNLEVLDLSYNKITGPNVLPWILSTGCDGLLHLALKGNKLTGETDFSGCGNLEHLDLSSNNFSVAIPSLGECSSLEYLDLSGNKYFGDIARTISPCKILVYLNVSSNQFSGPVPTLPSGSLQFVYLSGNHFAGQIPLSITDLCSTLIELDLSSNNLTGPVPPEFSACSSLESFDISANKFTRELPIDIFVQMRSLKELSLSFNQFVGKLPESVSKLVGLESLDLSSNNLTGPIPKVLCQDPRNRLKELYLQNNVFTGSIPPTLSNCSNLVALDLSFNYLWGTIPSSLGSLSNLKDLIIWLNQLHGEIPQELGYIKTLQNLILDFNDLSGVIPSGLSNCTQLNWISLSNNRLTGEIPPWIGKLSNLAILKLSNNSFSGSIPPELGDCNSLIWLDLNTNMLTGPIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQLQLNRISTRNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGTIPKEIGTMYYLYILNLGHNNISGKIPEELGSMKNLNILDLSYNRLEGLIPPSLTGLSLLTEIDFSNNFLSGLIPESGQFDTFPAYRFQNNSGLCGVPLPPCGPDSGTGDGNQNEKSNNKKQASLAGSVAMGLLFSLFCVFGLMIIAIETRKRRKKKEAVLDAYVDGNSNSGNANGSWKLTSGKEALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKAGIKLNWAVRRKIAIGAARGLAFLHHSCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMNALDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLRISDVFDPELMKEEPSLEIELLQHLKVACTCLDDRAWKRPTMMQVMAMFKEIQAGSGVDSQSTIATEDEGFHAIEMMEMSIKEAPELSKP* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1759 1202 SMART serkin_6 889 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1759 1202 SUPERFAMILY L domain-like 65 225 - -
Dod09g1759 1202 SUPERFAMILY L domain-like 182 418 - -
Dod09g1759 1202 Pfam Leucine Rich repeats (2 copies) 234 272 IPR025875 -
Dod09g1759 1202 PANTHER SYSTEMIN RECEPTOR SR160 23 1176 - -
Dod09g1759 1202 SMART LRR_typ_2 183 208 IPR003591 -
Dod09g1759 1202 SMART LRR_typ_2 399 423 IPR003591 -
Dod09g1759 1202 SMART LRR_typ_2 375 398 IPR003591 -
Dod09g1759 1202 SMART LRR_typ_2 545 569 IPR003591 -
Dod09g1759 1202 SMART LRR_typ_2 733 756 IPR003591 -
Dod09g1759 1202 SMART LRR_typ_2 709 732 IPR003591 -
Dod09g1759 1202 SMART LRR_typ_2 232 255 IPR003591 -
Dod09g1759 1202 SMART LRR_typ_2 158 181 IPR003591 -
Dod09g1759 1202 SUPERFAMILY L domain-like 374 777 - -
Dod09g1759 1202 Gene3D Transferase(Phosphotransferase) domain 1 965 1166 - -
Dod09g1759 1202 Gene3D - 600 660 - -
Dod09g1759 1202 Pfam Leucine rich repeat N-terminal domain 45 77 IPR013210 -
Dod09g1759 1202 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 23 1176 - -
Dod09g1759 1202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1011 1023 IPR008271 GO:0004672|GO:0006468
Dod09g1759 1202 ProSiteProfiles Leucine-rich repeat profile. 234 256 IPR001611 GO:0005515
Dod09g1759 1202 Pfam Leucine Rich Repeat 427 449 IPR001611 GO:0005515
Dod09g1759 1202 Pfam Protein kinase domain 889 1159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1759 1202 MobiDBLite consensus disorder prediction 775 796 - -
Dod09g1759 1202 CDD STKc_IRAK 895 1164 - -
Dod09g1759 1202 Pfam Leucine rich repeat 499 557 IPR001611 GO:0005515
Dod09g1759 1202 Pfam Leucine rich repeat 688 744 IPR001611 GO:0005515
Dod09g1759 1202 Pfam Leucine rich repeat 352 412 IPR001611 GO:0005515
Dod09g1759 1202 ProSitePatterns Protein kinases ATP-binding region signature. 895 918 IPR017441 GO:0005524
Dod09g1759 1202 PRINTS Leucine-rich repeat signature 709 722 - -
Dod09g1759 1202 PRINTS Leucine-rich repeat signature 402 415 - -
Dod09g1759 1202 ProSiteProfiles Protein kinase domain profile. 889 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1759 1202 ProSiteProfiles Leucine-rich repeat profile. 185 206 IPR001611 GO:0005515
Dod09g1759 1202 Pfam Brassinosteroid receptor island domain 595 659 IPR045381 -
Dod09g1759 1202 Pfam Leucine Rich repeat 326 341 IPR001611 GO:0005515
Dod09g1759 1202 Pfam Leucine Rich repeat 184 198 IPR001611 GO:0005515
Dod09g1759 1202 Gene3D Ribonuclease Inhibitor 47 778 IPR032675 -
Dod09g1759 1202 Gene3D Phosphorylase Kinase; domain 1 850 964 - -
Dod09g1759 1202 SUPERFAMILY Protein kinase-like (PK-like) 870 1161 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1759 Dod-Chr9 39251198 39255332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1759 33 1198 Receptor kinase-like Gene Family AT4G39400 69.991 0.0 1587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dod09g1759 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1759 K13415 - gmx:100499629 1807.73