Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1758 ATGTCTACAACTCCCGAAACCATAATAAACGAAAGCTTGTTTGAAGAGCAGGATCATCAGATCCCAACGGAGATGGGCTTCGTTCCTTTCCCAACAAACCTGACCTTCCCTCCTTTGGGATGCCATCAATCTTTGAAAGCTTTTGGTGCCATAGCAGCTCCTTCACTTTCATCCGAAGGGGTTTCAACTGAAAATTTAATTGAAACCCTACTTGCAACCACTGTTCAGAAACCAGTAACTTCTAGTTTGGGAAGAGGAGGACAAGGAGATCAATTCCTTTCCCTGAACAGATCGAGTGCAAATTCATGGGCATGGGGAGAAGTAACCGATTGCTTGATGGGTAAAAGAATAAGTGGAGGCGATCGTGATCATGTTCATAATCATCATCATCTAGGGGTTCCAGCCATGAAAATGAAGAAAATGAAGGCAAGGAGGAAGGTGCGGGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCAAGAAGCTACTACCGTTGCACCCAAGATAATTGTCGAGTAAAGAAACGCGTGGAGCGTTTAGCTGAGGATCCAAGGATGGTGATAACTACATATGAAGGGAGACATGTGCACTCTCCATCAAATGAACTTGAAGACTCGGAAACTCCTTCTCAACTCAGCGATTTCTTGTGGTAG 723 0.4495 MSTTPETIINESLFEEQDHQIPTEMGFVPFPTNLTFPPLGCHQSLKAFGAIAAPSLSSEGVSTENLIETLLATTVQKPVTSSLGRGGQGDQFLSLNRSSANSWAWGEVTDCLMGKRISGGDRDHVHNHHHLGVPAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSETPSQLSDFLW* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1758 240 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1758 240 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 58 229 IPR044810 GO:0003700
Dod09g1758 240 MobiDBLite consensus disorder prediction 226 240 - -
Dod09g1758 240 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 58 229 - -
Dod09g1758 240 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1758 240 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1758 240 Gene3D WRKY domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1758 240 MobiDBLite consensus disorder prediction 215 240 - -
Dod09g1758 240 SUPERFAMILY WRKY DNA-binding domain 155 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1758 Dod-Chr9 39231850 39235574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1758 42 240 WRKY Transcription Factor Family AT4G39410 48.387 1.70e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod09g1758 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1758 - - gmx:100127389 342.813