Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1757 ATGGCTCAAAGGTGGGCGTCTTGTTTGGCATTGGTCCTAGCTCATTGCCTAGTACAGGACGCCCATGGGGCAGAGTCTATACAAGGTCTTGGTGTCAATTTGGGTGCACTAGCATCTCACCCTATGAATCCTAACATTGTGGTGAACATGTTGAAGGACAATGGAATCAAGAAGGTTAAACTATTCGATTCAGATTCTTGGACCGTGAGTGCTTTTCGTGGTACCGACATTGAAGTTATGGTTGGCATTCCTAATGATCAATTGAACAAATTTGCAAAAAGTAGCAGAGATGCAGAAAATTGGGTGAAAGAAAATGTCACCAGCCATCTTCGTAGTGGTGGCGTCAACATCAGATACGTAGTTGTTGGAAATGAGCCATTCTTGACAAGTTACAATGGTTCGTATACACATACCACATTCCCAGCAATGGAAAATATTCAAAGAGCTATTGAAAAGGCTGGTCTTGGAGATAAAGTGAAGGTGACCACGGCTTTAAATGCTGATGTATACGCGTCTAACTCAAACAAGCCCTCAGATGGAGACTTTCGAAGGGACATTTATGATGTCATGATGCAAATAGTGCAATTCCTTCATGAAAAGAAGTCACCTTTCGTTGTCAACATATACCCTTTCCTTAGTCTATATCAAAATGAAGGTTTCCCAGAGGATTTTGCATTCTTTGATAGCCAAAGCAGAACAATTGACGACAAGAACTCACACTATAGCAATGTGTTCGACGCAAATTTGGATACCCTTGTTTGGTCACTAAAAAAGGCCGGTTACCCTGAAGTGAAAATCTTGGTTGGTGAAATTGGATGGCCAACTGATGGTGACAAAAGGGCTAATCCAGATAAAGCAAAAAGGTTCTACCATGGGTTCCTTAAGAAAATGGCAAGCAAGAAAGGAACCCCACTTCTCCCTGGACCCATGGAAGTGTACCTCTTTGCTCTTTTTGATGAGAACTTGAAGAGTATTGCACCTGGCAACTTTGAGCGTCACTGGGGGATTTTTCGTTATGATGGGAAGGCTAAGTTCCCCATTGATTTTTCTGGCCAGGGAGAGGAAAAATGGCCCGTGGGAGCCAAAGGGGTTCGGTACCAAGAGAGAAAATGGTGCGTCCTCAACAGTGATGTTAGGGACATGAGCGTGGTGCCAGGGGCATTGGACTATGCTTGTGGAGGTGCTGATTGTACAAGCTTGGGATACGGTTCTTCTTGTGAGAATCTTGATCTTGCTGGCAATGCTTCTTATGCTTTCAACCAATACTTTCAGACAAGGGACCAAAGTGTTGATGCTTGTATTTTCAATGGATTGGGCTCTATTGTGACAAATGATCCATCAAAAGGAAGTTGCTTGTTCCCTATAATAATCGAGAGCAGTGGACAAGCCCTCAAGGCAATAACTACAGTGGGAAGCCTTTTGATTGGGTTGTCATTGTTTTTTGTAATGTGA 1452 0.4311 MAQRWASCLALVLAHCLVQDAHGAESIQGLGVNLGALASHPMNPNIVVNMLKDNGIKKVKLFDSDSWTVSAFRGTDIEVMVGIPNDQLNKFAKSSRDAENWVKENVTSHLRSGGVNIRYVVVGNEPFLTSYNGSYTHTTFPAMENIQRAIEKAGLGDKVKVTTALNADVYASNSNKPSDGDFRRDIYDVMMQIVQFLHEKKSPFVVNIYPFLSLYQNEGFPEDFAFFDSQSRTIDDKNSHYSNVFDANLDTLVWSLKKAGYPEVKILVGEIGWPTDGDKRANPDKAKRFYHGFLKKMASKKGTPLLPGPMEVYLFALFDENLKSIAPGNFERHWGIFRYDGKAKFPIDFSGQGEEKWPVGAKGVRYQERKWCVLNSDVRDMSVVPGALDYACGGADCTSLGYGSSCENLDLAGNASYAFNQYFQTRDQSVDACIFNGLGSIVTNDPSKGSCLFPIIIESSGQALKAITTVGSLLIGLSLFFVM* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1757 483 Gene3D Glycosidases 28 356 - -
Dod09g1757 483 SUPERFAMILY (Trans)glycosidases 30 349 IPR017853 -
Dod09g1757 483 SMART X8_cls 370 453 IPR012946 -
Dod09g1757 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 8 467 - -
Dod09g1757 483 Gene3D - 366 459 - -
Dod09g1757 483 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 467 IPR044965 GO:0004553|GO:0005975
Dod09g1757 483 ProSitePatterns Glycosyl hydrolases family 17 signature. 264 277 IPR000490 GO:0004553|GO:0005975
Dod09g1757 483 Pfam X8 domain 370 439 IPR012946 -
Dod09g1757 483 Pfam Glycosyl hydrolases family 17 30 349 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1757 Dod-Chr9 39221048 39222725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1757 24 459 Miscellaneous Gene Families AT5G64790 56.881 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1757 - - gmx:100794658 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1434 08 27236600 27242056 Dod09g1757 09 39221048 39222725 PCT