Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1752 ATGGACTTGGCCGCGAAGCTTCACCACCTCGACCTCACCTCAACCTTCCTCACTGGCTCCGTCATCCTCGACTCACCAAAACCTCGTACCCGACCACCACCACCACCACCCCATCTTCGCCCACTCTCAACCCGCATGTGCAACGCTCATTTAATCAACAACACCAACCGAACAAGATTCTTCGGCCCATTAAGGCCCAATTCCACCGCCACACCCCGCTTGTCCGCAGTGGCCACCGACGACACCTCCCTCGCCGAAACGACAACCCAAGAAGAAGAAAACGACGACATCGAGTCCCTCTTCTCCGACCCTTCAAACGACGGCTTCGACAAACGACGCGCAAACAACAAGCAATCCTACACCGGCGCTTCGAGCATTTCCTCCGGCGTTAAGTTAGAAAACATTACCAAGAGCTACAAAGGCGTCACCGTTCTGAAATACGTGAGTTGGGAAGTGAAGAAGGGAGAGAAAGTGGGTTTGGTTGGCGTGAACGGTGCGGGGAAAACGACCCAGATGAGGATTATTGCGGGTCAGGAAGAACCCGATGCAGGGAACGTGATTAAAGCGAAGCCAAACATGAAAATCGCGTTTTTGAGCCAGGAGTTTGAGGTGTCACCGAGTAGGACGGTGAGGGAGGAGTTTATGAGCGCGTTCAAGGAGGAGATGGAGATAGCGGGGAAGTTGGAGAAGGTTCAGAAGGCCTTGGAAGGTGCTGTTAATGATTTGGAGTTGATGGGGAGGCTTCTTGATGAATTTGATTTGCTTCAGAGGAGGGCACAGTCTGTGGACTTGGATGAGGTTGATGCTAAGATAAGTAAGTTGGTCCCTGAGCTTGGCTTTGCCCCTGAGGATTCTGACAGGTTGGTTGCTTCTTTCAGCAGTGGCTGGCAGATGAGGATGTCTCTTGGCAAGATTTTACTTCAGGAGCCAGATTTGTTGCTGTTGGATGAGCCTACAAATCACCTTGATCTTGATACCATTGAGTGGCTTGAAGCCTATCTTAACCAGCAGGATGTGCCCATGGTTATTATTTCCCATGACAGAGCATTTCTTGATCAGCTGTGTACAAAAATTGTGGAAACTGACATGGGAGTATCTAGGACGTATGAGGGAAATTATTCTCAGTATATAGTTTCTAAGGCAGCGTGGATTGAGGCACAGTATGCTGCATGGGAAAAGCAGCAGAAAGAAATTGAACAGACCAAAGGCTTGATAAATAGGTTAGGTGCTGGAGCAAATTCTGGCCGGGCTTCATCTGCTGAGAAGAAACTGGAGAGACTTCAGGAAGAGGAACTAGTAGAGAAGCCATTTGAAAGGAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGGAGTGGAAGATCTGTTGTAGCAATTAAGAACTTGGAGTTTGCCTTTGAGGATAAGACACTTTTCAAGAAGGCAAATCTTACAATCGAAAGAGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTACTGAAACTGATAATGGGTATAGAGAAGCCAATGGGGGGTGAAGTTGTGCTTGGGGAGCATAATGTATTACCTAACTATTTTGAGCAAAATCAGGCTGAAGCCCTTGATCTGGACAAGACAGTGCTTGAGACAGTAGAAGAAGCTGCAGAGGACTGGAGGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAAGCTGATATGCTTGACCGAAAGGTTGCCCTATTGAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAGTTCATGGTAAAACCATCAACTCTGCTTGTGTTGGATGAACCAACCAATCACCTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAATGAGTACCAGGGCACTGTTATCACAGTGTCTCATGATCGATACTTCATAAAACAGATAGTTAATAGAGTGATAGAAGTTAAAGATGGCACTTTACAGGATTATGCTGGGGATTACAATTATTATTTAGAGAAGAATTTAGATGCCAGGGAAAGAGAGCTTGAACGCGAAGCTGAGCTTGAGGACAAAGCTCCTAAAGTAAAAGCCAAATCAAAGATGTCCAAGGCTGAGAAAGAAGCACGGAAGAAACAAAAGATGCAGGCCTTTCAGGCAGCAAAACAAAAGTCTAAAGGTATGAAAAATGCAAAGAGATGGAAGTGA 2175 0.4616 MDLAAKLHHLDLTSTFLTGSVILDSPKPRTRPPPPPPHLRPLSTRMCNAHLINNTNRTRFFGPLRPNSTATPRLSAVATDDTSLAETTTQEEENDDIESLFSDPSNDGFDKRRANNKQSYTGASSISSGVKLENITKSYKGVTVLKYVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDAGNVIKAKPNMKIAFLSQEFEVSPSRTVREEFMSAFKEEMEIAGKLEKVQKALEGAVNDLELMGRLLDEFDLLQRRAQSVDLDEVDAKISKLVPELGFAPEDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEAYLNQQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQYIVSKAAWIEAQYAAWEKQQKEIEQTKGLINRLGAGANSGRASSAEKKLERLQEEELVEKPFERKQMKIRFPERGRSGRSVVAIKNLEFAFEDKTLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGIEKPMGGEVVLGEHNVLPNYFEQNQAEALDLDKTVLETVEEAAEDWRIDDIKGLLGRCNFKADMLDRKVALLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVITVSHDRYFIKQIVNRVIEVKDGTLQDYAGDYNYYLEKNLDARERELEREAELEDKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGMKNAKRWK* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1752 724 MobiDBLite consensus disorder prediction 674 704 - -
Dod09g1752 724 MobiDBLite consensus disorder prediction 64 85 - -
Dod09g1752 724 Pfam ABC transporter 359 446 IPR032781 -
Dod09g1752 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 130 388 IPR003439 GO:0005524
Dod09g1752 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 373 IPR027417 -
Dod09g1752 724 ProSitePatterns ABC transporters family signature. 292 306 IPR017871 GO:0005524
Dod09g1752 724 MobiDBLite consensus disorder prediction 674 724 - -
Dod09g1752 724 MobiDBLite consensus disorder prediction 64 125 - -
Dod09g1752 724 Pfam ABC transporter 473 604 IPR003439 GO:0005524
Dod09g1752 724 MobiDBLite consensus disorder prediction 22 42 - -
Dod09g1752 724 Pfam ABC transporter 145 320 IPR003439 GO:0005524
Dod09g1752 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 457 672 IPR003439 GO:0005524
Dod09g1752 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 662 IPR027417 -
Dod09g1752 724 MobiDBLite consensus disorder prediction 27 41 - -
Dod09g1752 724 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 70 714 - -
Dod09g1752 724 Coils Coil 684 713 - -
Dod09g1752 724 SMART AAA_5 154 364 IPR003593 -
Dod09g1752 724 SMART AAA_5 481 649 IPR003593 -
Dod09g1752 724 Gene3D - 419 688 IPR027417 -
Dod09g1752 724 CDD ABCF_EF-3 459 649 - -
Dod09g1752 724 Gene3D - 126 411 IPR027417 -
Dod09g1752 724 CDD ABCF_EF-3 130 360 - -
Dod09g1752 724 MobiDBLite consensus disorder prediction 86 100 - -
Dod09g1752 724 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 70 714 - -
Dod09g1752 724 ProSitePatterns ABC transporters family signature. 576 590 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1752 Dod-Chr9 39180691 39185615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1752 454 674 Calmodulin-binding Proteins AT2G36910 24.390 4.66e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1752 - - adu:107470294 1164.44