Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1734 ATGTCCAGAGAAAGGGAGCGATTTGATGAGATAGGCAAGAAGATCAAGAGGGAAGATGTTTCTTCTCAAATGGGGAGAAGGCACATGTTGGGCCCATCTGGAACCCTAAACACCATTACCCCATGTGCAGCATGTAAGCTTCTGAGGAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATACTTCTCTCCCCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTTTTTGGTGCTAGCAATGTCTCAAAGATGCTAATGGAGGTACCGGAGTTTCAGAGAGCCGATGTTGCAAATAGTCTAGTTTATGAGGCTAATGTGAGGCTAAGAGACCCGGTCTATGGATGCATGGGTGCAATTTCTGCTTTGCAGCAAGAAGTTCAATCTTTACAGGCTGAACTTAGTGCAGTAAGGGCAGAAATACTTAAATACAAATTCAGGGAAGCTAACAATATGATACCCTCTTCTCATGTTGCAATGATCCCCCCTTCATCTGGGCCTGTTTCAATTGCTGCTCCACCGCCACCGCCACCTCCTCCGCCACCACCACCACCTCTTCCTCCACTTTCTTCCTCTTCTTCCATGTACATCCAACAGAGGGCTCCCACCAATTATAGCAGAATTTCAAGTGACAATATTTCTTATTTTGGTTAA 654 0.4572 MSRERERFDEIGKKIKREDVSSQMGRRHMLGPSGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPEFQRADVANSLVYEANVRLRDPVYGCMGAISALQQEVQSLQAELSAVRAEILKYKFREANNMIPSSHVAMIPPSSGPVSIAAPPPPPPPPPPPPPLPPLSSSSSMYIQQRAPTNYSRISSDNISYFG* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1734 217 MobiDBLite consensus disorder prediction 191 217 - -
Dod09g1734 217 Pfam Lateral organ boundaries (LOB) domain 41 138 IPR004883 -
Dod09g1734 217 PRINTS Wilm's tumour protein signature 171 185 - -
Dod09g1734 217 PRINTS Wilm's tumour protein signature 123 139 - -
Dod09g1734 217 MobiDBLite consensus disorder prediction 164 217 - -
Dod09g1734 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 217 - -
Dod09g1734 217 Coils Coil 120 140 - -
Dod09g1734 217 MobiDBLite consensus disorder prediction 167 190 - -
Dod09g1734 217 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
Dod09g1734 217 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 24 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1734 Dod-Chr9 39030423 39032697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1734 1 152 AS2 family AT2G30340 65.644 8.61e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod09g1734 LOB 5.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1734 - - lang:109326265 338.576