Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1730 ATGGAAGAGTACAATATAGCTATGAAGAGGATGATGAGGAACCCTTACGAGTATCACCACGATCTGGGTATGAATTACACACTTATAACTGAGTATTTGATTGTGGGCTCTCAACCCCAGAAACCTGAAGACATAGATCATCTCAAAAAGGAAGAGGGTGTGGCATACATTCTCAACTTGCAACAGGATAACGATGTCGACTATTGGGGAATAGACTTGCAGTCGATAATAAGAAGGTGTCGTGAACTTGAAATTCGGCATATGAGGAGTCCTGCAAAAGATTTTGACCCGAACTCCCTGCGAACTGAACTACCTAAAGCGGTCTCATCCTTGGAATGGGCGATTTCTGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCTGGACTTGGGAGGGCTCCAGCAGTGGCTATCGCTTATTTGTTCTGGTTTTGTGGCATGAATCTCAATGCAGCATATGATATGCTAACTTCGAAGAGACCTTGTGGACCAAATAAAAGAGCAATACAAGGAGCTACTTATGATTTGGCTAAGAATGATCCATGGAAGGAGCCATTTGAGAGTCTTCCAGATCATGCATTTGAGGATATAGCAGACTGGGAGAGGAACTTGATTCAAAATCGGGTCCGTTCCCTTCGTGGGACTTGA 648 0.4367 MEEYNIAMKRMMRNPYEYHHDLGMNYTLITEYLIVGSQPQKPEDIDHLKKEEGVAYILNLQQDNDVDYWGIDLQSIIRRCRELEIRHMRSPAKDFDPNSLRTELPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFCGMNLNAAYDMLTSKRPCGPNKRAIQGATYDLAKNDPWKEPFESLPDHAFEDIADWERNLIQNRVRSLRGT* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1730 215 ProSiteProfiles Dual specificity protein phosphatase domain profile. 25 182 IPR020422 GO:0006470|GO:0008138
Dod09g1730 215 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 1 215 - -
Dod09g1730 215 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 102 161 IPR000387 GO:0016311|GO:0016791
Dod09g1730 215 SMART dsp_5 25 175 IPR020422 GO:0006470|GO:0008138
Dod09g1730 215 Pfam Dual specificity phosphatase, catalytic domain 46 165 IPR000340 GO:0008138|GO:0016311
Dod09g1730 215 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 167 IPR029021 -
Dod09g1730 215 Gene3D Protein tyrosine phosphatase superfamily 8 215 IPR029021 -
Dod09g1730 215 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 215 - -
Dod09g1730 215 CDD DSP_laforin-like 24 171 IPR045204 GO:0019203|GO:0046838
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1730 Dod-Chr9 38978952 38980431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1730 1 215 Protein tyrosine phosphatase (PTP) family AT3G10940 82.326 1.27e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1730 - - gmx:100787079 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1730 09 38978952 38980431 Dod09g1730 09 38978952 38980431 ECH