Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1729 ATGGAGTCCCGTGGAGACAACGGTGCAGTTCGATTCCCGTTGTCCGCATCCAGCGCTTTGGTCATTCAGAAGGGGGACATTACCAAATGGTCCATCGATGGTTCCTCCGACGCTATAGTGAATCCCGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGAGCCATACATATGGCTGCTGGTCCTGAACTTCTTCAGGCGTGTTACAGTGTTCCAGAAGTGAGGCCTGGGGTTCGCTGCCCTACTGGGGAGGCAAGAATCACACCAGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACTGTTGGGCCAATCTACAATTCCAATAGTAACCCTGCTGCCTCTCTTGCAAGTGCTTATAGGAATAGTTTGAGGGTTGCAAAGGAGAAAAACATTCAGTATATAGCATTTCCGGCCATATCATGCGGTGTCTTTGGATATCCTTATGATGAGGCTGCCACAGTAGCAATTTCTGCCATCAGGGAGTTTCGAAATGACTTTAAGGAGGTCCACTTTGTTTTGTTCTTGCAAGATATCTATGATGTTTGGCTAAATAAGGCGAATGATTTGCTGAAAGATTAG 585 0.4684 MESRGDNGAVRFPLSASSALVIQKGDITKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELLQACYSVPEVRPGVRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLASAYRNSLRVAKEKNIQYIAFPAISCGVFGYPYDEAATVAISAIREFRNDFKEVHFVLFLQDIYDVWLNKANDLLKD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1729 194 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 10 193 - -
Dod09g1729 194 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 10 193 - -
Dod09g1729 194 SUPERFAMILY Macro domain-like 19 190 IPR043472 -
Dod09g1729 194 ProSiteProfiles Macro domain profile. 7 192 IPR002589 -
Dod09g1729 194 CDD Macro_OAADPr_deacetylase 20 189 - -
Dod09g1729 194 Pfam Macro domain 40 157 IPR002589 -
Dod09g1729 194 SMART YBR022w_8 19 157 IPR002589 -
Dod09g1729 194 Gene3D Leucine Aminopeptidase, subunit E, domain 1 6 193 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1729 Dod-Chr9 38970726 38973075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1729 25 130 C2H2 Transcription Factor Family AT5G01310 34.454 1.27e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1729 K23518 - gmx:100811169 326.25