Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g1715 | ATGGCAATTGCAGCAACCTCAGCCATCTCACTTCTCTTCTTTCTTCTTAATCTATGCCTTAAAGGCACTTATGGTGACTATGGAGGTGGATGGGAAGGTGGTCATGCCACATTTTATGGTGGCGGAGATGCATCAGGCACAATGGGAGGGGCTTGTGGTTATGGAAACTTGTACAGCCAAGGCTATGGCACTAACACTGCAGCACTCAGCACTGCTCTATTCAACAATGGCTTGAGCTGCGGGTCTTGCTACGAGATGAAGTGTAACGGTGACCCCAAATGGTGCCTCCCTGGCACCATCACAGTCACTGCCACAAACTTCTGCCCTCCAAACAATGCCTTGCCCAATGACAACGGTGGTTGGTGCAACCCTCCCCTTCAGCACTTTGATCTTGCTGAGCCTGCTTTCCTACAAATTGCTCAATACAAAGCTGGAATTGTTCCTGTTTCCTTCAGAAGAGTCCCCTGTGCCAAGAAAGGAGGAATAAGGTTCACAATCAATGGTCACTCTTACTTCAACTTGGTGCTGATCTCAAATGTTGCTGGAGCAGGAGATGTTCACTCTGTGTCCATCAAAGGGTCCAAGACTGGGTGGCAAACCATGTCAAGGAACTGGGGCCAGAACTGGCAGAGCAACTCTTACCTCAATGGCCAGAGCCTCTCCTTCCAGGTCACCACCAGTGATGGCAGGACCATCACTAGCAACAATGTTGCACCTGCTAATTGGCAATTTGGACAGACATTTGAGGGGTCACAGTTTTAG | 762 | 0.4934 | MAIAATSAISLLFFLLNLCLKGTYGDYGGGWEGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCNGDPKWCLPGTITVTATNFCPPNNALPNDNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPVSFRRVPCAKKGGIRFTINGHSYFNLVLISNVAGAGDVHSVSIKGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSNNVAPANWQFGQTFEGSQF* | 254 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g1715 | 253 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 49 | 161 | IPR007112 | - | |
Dod09g1715 | 253 | Pfam | Lytic transglycolase | 66 | 151 | IPR009009 | - | |
Dod09g1715 | 253 | Pfam | Expansin C-terminal domain | 162 | 239 | IPR007117 | - | |
Dod09g1715 | 253 | Gene3D | - | 21 | 157 | IPR036908 | - | |
Dod09g1715 | 253 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 171 | 250 | IPR007117 | - | |
Dod09g1715 | 253 | PANTHER | EXPANSIN-A15 | 5 | 253 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PANTHER | EXPANSIN | 5 | 253 | - | - | |
Dod09g1715 | 253 | PRINTS | Expansin/Lol pI family signature | 48 | 66 | IPR007118 | GO:0005576 | |
Dod09g1715 | 253 | PRINTS | Expansin/Lol pI family signature | 70 | 88 | IPR007118 | GO:0005576 | |
Dod09g1715 | 253 | PRINTS | Expansin/Lol pI family signature | 144 | 160 | IPR007118 | GO:0005576 | |
Dod09g1715 | 253 | PRINTS | Expansin/Lol pI family signature | 198 | 212 | IPR007118 | GO:0005576 | |
Dod09g1715 | 253 | PRINTS | Expansin/Lol pI family signature | 30 | 45 | IPR007118 | GO:0005576 | |
Dod09g1715 | 253 | PRINTS | Expansin/Lol pI family signature | 236 | 250 | IPR007118 | GO:0005576 | |
Dod09g1715 | 253 | Gene3D | - | 160 | 253 | IPR036749 | - | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 136 | 149 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 160 | 172 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 236 | 252 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 119 | 136 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 172 | 193 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 100 | 110 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 61 | 75 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 88 | 99 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | PRINTS | Expansin signature | 207 | 228 | IPR002963 | GO:0009664 | |
Dod09g1715 | 253 | SMART | dpbb_1 | 66 | 151 | IPR007112 | - | |
Dod09g1715 | 253 | SUPERFAMILY | Barwin-like endoglucanases | 12 | 179 | IPR036908 | - | |
Dod09g1715 | 253 | SUPERFAMILY | PHL pollen allergen | 158 | 250 | IPR036749 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g1715 | Dod-Chr9 | 38877225 | 38878849 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod09g1715 | 1 | 253 | Expansin Gene Family | AT2G40610 | 81.890 | 2.03e-152 | 423 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod09g1715 | - | K20628 | gmx:100807183 | 478.018 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod08g0935 | 08 | 11459974 | 11462349 | Dod09g1715 | 09 | 38877225 | 38878849 | ECH | |
Dod05g0420 | 05 | 5876288 | 5879442 | Dod09g1715 | 09 | 38877225 | 38878849 | ECH | |
Dod09g1715 | 09 | 38877225 | 38878849 | Dod09g1715 | 09 | 38877225 | 38878849 | ECH |