Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1709 ATGCAAGCGATATTGAACATGAGGGTACTTTTCTGCTTGTTCTCCTCGCTTTTTCTTCTGGTGCCTTCTCCGGCTTCGGTGACGGCGGTGAACCCGTCCTTGAACGACGACGTTCTGGGGCTGTTAGTGTTCAAGGCTGATATTCAAGATCCCAAGGGAAAGCTCGCGTCCTGGAACGAAGACGACGAGAGCGCGTGTGGTGGAAGTTGGGTGGGTGTGAGGTGCAACCCTAGATCGAACAGGGTCGTTGAGCTCAACCTCGATGGGTTCTCTCTCTCTGGGAAGATAGGTCGTGGCTTGCTTCGTTTGCAGTTCCTGAGGAGGCTCTCTCTCGCAAACAACAACCTCACTGGGAACATTAGCCCCAACATTGCTCACATCGACAACCTTAGAGTCATCGACTTGAGTGACAACAATCTCTCTGGGGAAGTTCCAGATGATTTCTTCCGACAATGTGGGTCCCTCAGGGTTGTTTCCTTCTCCAGGAACAGGTTCTCTGGGAAGGTTCCTTCTAGTTTGGGGTCTTGTTCAGCTATTGCTTCCATTGACCTATCTTCTAACCAGTTCTCTGGTTCTGTTCCTGATGGGATTTGGGGTTTGAGTGGACTCAGGTCTTTGGATTTGTCTGGGAACTTGTTGGAGGGTGAGATTCCGAAAGGGGTTGATGCGTTGAAGAACTTGAGGAGTATTAGTTTGGCTAACAATCAGATTTCTGGGAAGATTCCAGATGGATTTGGAAGCTGCTTGCTGTTGAGGTCTATTGATTTCGGCGAGAATTCGCTTTCTGGTACCCTGCCAGGGGATCTGAAGGAGCTCACATTGTGTAATTTCCTTAATCTGCGTGGGAATGCTCTCTCTGGAGAGTTTCCTGAGTGGATTGGAGAGATGAAAGCCCTTGAGACATTAGACCTCTCAAGGAATAGACTTTCGGGTCAGGTGCCGATTTCTATTGGAAATCTTCAGTCATTGAAGACATTGAATCTTTCTGGAAATGGTTTCACTGGTATCCTGCCAGAGTCTATGACTAATTGCACAAGTCTTTTGGCCTTGGATGTCAGTGGCAATTCAATGTCCGGGGCTCTTCCTTCTTGGATTTTCAAGTCAGATTTGGAGAAGGTTTTGGTATCAGAAAACAGACAGAGTGGTGGTGGCTTGAAGAAAAGCCCTTTGTATTCTTCGTCATTGGCTGAAGTTGCGGTTCAAAGTCTTCAAGTGTTGGATTTGTCTGACAATGCATTTTCTGGAGAAATCTTATCTGCCATTGTTGGTTTAAGCAGCTTGCAGGTTTTGAATTTATCGAACAACTCTCTTAAGGGTCCCATACCAGCTGCAATTGGTGAATTGAAAATGTTGTCTAGTCTTGACTTGAGTGTGAATCAGCTAAACGGAAGCATCCCTTTGGAAATAGGAGGTGCCATGTCCCTGAAAGAGCTGAGATTGGACAAGAACTTCCTAGTTGGGAAAATTCCAACCTCAATTGAGAACTGCTCTTCGTTATCAACTTTGATTCTTTCAAATAACAGACTGAGTGGCTCGATACCTGCAGCTGTTGCAAAACTTAGCAACCTACAAACTGTGGACTTATCATTTAACAACCTTACTGGAAGCCTTCCCAAGCAATTGGCCAACCTTCCCAATCTTATTTCCTTCAATTTATCTCACAACAACCTCCAAGGTGAACTGCCAGCTGGTGGTTTCTTCAACACCATTTCGCCTTATTCTGTTTCTGGGAATCCATCTCTTTGTGGCTCTGCAGTCAACAAATCATGCCCTGCTGTCCTCCCTAAGCCTATTGTTCTAAATCCCAACACTTCCACTGACTCTGGCACGGGTGCAGTGGCTCCAACTTTGGGACACAAAAGAATCATCCTCAGCATTTCTGCACTCATTGCCATTGGTGCAGCAGCTGTCATTGTCATTGGTGTAATTGGCATCACTGTTCTCAATCTCCGAGTTCGGGCTACCACATCTCGATCTGCAGCTGCCCTCACATTCTCTGCAGGTGATGAATTCAGCCGCTCTCCAACCACAGATGCCAACTCTGGCAAACTTGTCATGTTTTCAGGCGAGCCTGATTTCAGCTCTGGAGCACATGCTTTGCTTAACAAGGATTGCGAGCTTGGGCGTGGAGGGTTCGGGGCCGTATACCAAACAGTTCTTAGAGATGGACGTTCGGTTGCTATAAAGAAGCTCACTGTATCCAGTCTTGTCAAGTCCCAAGAAGATTTTGAAAGAGAAGTGAAGAAATTAGGAAAAGTCAGACACCAAAATCTAGCGGAACTAGAAGGTTATTATTGGACTCCATCACTCCAGCTCCTCATATATGAGTATGTCTCGGGTGGCAGTCTCCATAAGCATCTCCATGAAGGATCAGGTGGAAACTTCCTCTCATGGAATGAGAGATTCAATGTGATTCTTGGGACAGCAAAGGCCTTGGCTCACTTGCACAACTCGAACATTATTCACTATAACATTAAGTCAACCAATATCCTTCTCGATAGCTATGGTGAACCTAAAGTAGGGGACTTTGGGCTAGCTAGGCTGTTACCAATGCTTGACCGATATGTCTTGAGCAGCAAAATTCAAAGCGCCCTTGGCTACATGGCACCCGAGTTTGCCTGCAAAACAGTGAAAATTACCGAGAAATGTGATGTTTATGGGTTCGGGGTTTTGGTTCTGGAGATTATTACAGGGAAGAGGCCTGTGGAATACATGGAGGACGATGTTGTGGTACTTTGTGACATGGTGAGAGGAGCTTTGGAAGAAGGCAGGGTGGAGGAATGCATTGATGAGAGGCTCCAAGGGAAGTTCCCAGCAGAGGAAGCAATTCCCGTGATGAAGCTAGGCTTGATTTGTACTTCACAAGTGCCATCTAATAGGCCAGACATGGGAGAGGTAGTTAATATACTGGAGCTGATAAGATGCCCCTCAGAAGGACAAGAGGAGTTGGTATGA 2955 0.4633 MQAILNMRVLFCLFSSLFLLVPSPASVTAVNPSLNDDVLGLLVFKADIQDPKGKLASWNEDDESACGGSWVGVRCNPRSNRVVELNLDGFSLSGKIGRGLLRLQFLRRLSLANNNLTGNISPNIAHIDNLRVIDLSDNNLSGEVPDDFFRQCGSLRVVSFSRNRFSGKVPSSLGSCSAIASIDLSSNQFSGSVPDGIWGLSGLRSLDLSGNLLEGEIPKGVDALKNLRSISLANNQISGKIPDGFGSCLLLRSIDFGENSLSGTLPGDLKELTLCNFLNLRGNALSGEFPEWIGEMKALETLDLSRNRLSGQVPISIGNLQSLKTLNLSGNGFTGILPESMTNCTSLLALDVSGNSMSGALPSWIFKSDLEKVLVSENRQSGGGLKKSPLYSSSLAEVAVQSLQVLDLSDNAFSGEILSAIVGLSSLQVLNLSNNSLKGPIPAAIGELKMLSSLDLSVNQLNGSIPLEIGGAMSLKELRLDKNFLVGKIPTSIENCSSLSTLILSNNRLSGSIPAAVAKLSNLQTVDLSFNNLTGSLPKQLANLPNLISFNLSHNNLQGELPAGGFFNTISPYSVSGNPSLCGSAVNKSCPAVLPKPIVLNPNTSTDSGTGAVAPTLGHKRIILSISALIAIGAAAVIVIGVIGITVLNLRVRATTSRSAAALTFSAGDEFSRSPTTDANSGKLVMFSGEPDFSSGAHALLNKDCELGRGGFGAVYQTVLRDGRSVAIKKLTVSSLVKSQEDFEREVKKLGKVRHQNLAELEGYYWTPSLQLLIYEYVSGGSLHKHLHEGSGGNFLSWNERFNVILGTAKALAHLHNSNIIHYNIKSTNILLDSYGEPKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLVLEIITGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDERLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELV* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1709 984 Pfam Leucine rich repeat 298 356 IPR001611 GO:0005515
Dod09g1709 984 Pfam Leucine rich repeat 474 533 IPR001611 GO:0005515
Dod09g1709 984 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515
Dod09g1709 984 Pfam Leucine rich repeat 402 461 IPR001611 GO:0005515
Dod09g1709 984 Gene3D Ribonuclease Inhibitor 315 594 IPR032675 -
Dod09g1709 984 Pfam Leucine Rich Repeat 129 148 IPR001611 GO:0005515
Dod09g1709 984 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Dod09g1709 984 ProSiteProfiles Protein kinase domain profile. 701 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1709 984 CDD STKc_IRAK 707 973 - -
Dod09g1709 984 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 982 - -
Dod09g1709 984 SUPERFAMILY Protein kinase-like (PK-like) 704 974 IPR011009 -
Dod09g1709 984 Pfam Leucine rich repeat N-terminal domain 35 76 IPR013210 -
Dod09g1709 984 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 16 982 - -
Dod09g1709 984 Pfam Protein tyrosine and serine/threonine kinase 703 969 IPR001245 GO:0004672|GO:0006468
Dod09g1709 984 SMART LRR_sd22_2 296 322 - -
Dod09g1709 984 SMART LRR_sd22_2 200 223 - -
Dod09g1709 984 SMART LRR_sd22_2 224 247 - -
Dod09g1709 984 SMART LRR_sd22_2 520 546 - -
Dod09g1709 984 SMART LRR_sd22_2 103 132 - -
Dod09g1709 984 SUPERFAMILY L domain-like 64 381 - -
Dod09g1709 984 Gene3D Transferase(Phosphotransferase) domain 1 778 982 - -
Dod09g1709 984 SUPERFAMILY L domain-like 278 594 - -
Dod09g1709 984 SMART LRR_typ_2 127 151 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 296 319 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 520 543 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 320 343 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 200 223 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 224 248 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 424 448 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 103 126 IPR003591 -
Dod09g1709 984 SMART LRR_typ_2 544 568 IPR003591 -
Dod09g1709 984 Gene3D Phosphorylase Kinase; domain 1 695 777 - -
Dod09g1709 984 Gene3D Ribonuclease Inhibitor 35 314 IPR032675 -
Dod09g1709 984 PRINTS Leucine-rich repeat signature 424 437 - -
Dod09g1709 984 PRINTS Leucine-rich repeat signature 299 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1709 Dod-Chr9 38816151 38821017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1709 19 983 Receptor kinase-like Gene Family AT3G56370 69.143 0.0 1305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dod09g1709 PK_Tyr_Ser-Thr 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1709 - - gmx:100791629 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1709 09 38816151 38821017 Dod09g1709 09 38816151 38821017 ECH