Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1707 ATGGCATCCGGGTCTGCAGCTTCATCTTCTTGGTCATCTTCAAATTGGGTCATGGATAGTGGTAGTAATGTTCCTCACGTTCTAGCTGTTGATGACAACCTCATTGATCGCAAACTTGTTGAGAAGCTCCTTAGGAATTCTTCTTGCAAAGTTACGACTGCAGAAAATGGGCCTAGGGCGTTGGAGTTCCTGGGCTTGACTAGTGGTGAACAGAACAACTTGAACGGGAGATCCAAAGTAAATTTGGTTATCACAGACTATTGCATGCCAGGGATGACAGGCTACGAGTTACTTAAGAAAATTAAGGAATCATCCTGCATGAGGGAGGTTCCAGTAGTGATCATGTCATCTGAGAACATACCAACACGGATTAACAAGTGTTTGGAAGAAGGAGCTCAGATGTTCATCTTAAAGCCCCTCAAACAATCTGATGTAAAGAAACTGACATGTCAGTTAATGAATTGGGAAGGTGAAACTTAG 480 0.4292 MASGSAASSSWSSSNWVMDSGSNVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLTSGEQNNLNGRSKVNLVITDYCMPGMTGYELLKKIKESSCMREVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMNWEGET* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1707 159 SMART REC_2 25 149 IPR001789 GO:0000160
Dod09g1707 159 ProSiteProfiles Response regulatory domain profile. 26 153 IPR001789 GO:0000160
Dod09g1707 159 Gene3D - 21 157 - -
Dod09g1707 159 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 155 IPR045279 GO:0009736
Dod09g1707 159 SUPERFAMILY CheY-like 25 153 IPR011006 -
Dod09g1707 159 Pfam Response regulator receiver domain 27 147 IPR001789 GO:0000160
Dod09g1707 159 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 19 155 - -
Dod09g1707 159 CDD REC_typeA_ARR 27 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1707 Dod-Chr9 38789618 38791262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1707 12 154 Response Regulator Gene Family AT3G56380 68.966 1.09e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g1707 Response_reg 6.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1707 K14492 - gmx:100499827 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1707 09 38789618 38791262 Dod09g1707 09 38789618 38791262 ECH