Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1704 ATGAGTATTCTTTGCCGTGAAAGTGCGTCGGAAAAGAGAGAGAGGGTCGTAAGGGAGCTTGTTGAGGGGCGAGAGTGTGCTACGAAGCTGAAGCATCTGCTTCAGAAGCCTGTTGGAGCTGAAGGGTATGTCTCAGCTGAGGCACTATTGGCCGAAGTGCAGAGATCTTTCACTGAGACCCTTTCTTTGCTGACTTCTTCTGAAGCTGATGGTGGTGGTAGTGATGAGGTTGCTGCAGCTTCCAGCAACATTGATCTGAGGTCTGAAGGCTCAAGTGAGAGTAGGAAGAGATCCTCCCCTCCCTTAAAGGATCGGAGAGGCTCCTACAGAAGAAGGAAGACAGAACACACATGGACCAATGTCTCCCAGAATATTGAGGATAATCATGCATGGAGAAAGTACGGACAGAAGGAAATCTTGAATTCCAAATTCCCCAGGAATTACTTCAGGTGCACTCGGAAGTTTGATCAAGGTTGCCGGGCAACCAAACAGGTGCAAAGGATGGAAGAGAACCCGGACATGTACCAAATCACATACATTGGTCTTCACACATGCACAGGCGCCATCAAAGTTCCACAAATGGCCACATGTCCTGATACTTGGGACTCTTCCCATCCTGATGACTCAAAAGTACCACAGGAGCAGGATCATCCCCCTACGGGTATTAGCTCACAAACCCCAACCTCAGTAAAACAAGAATATCCCAAAGAAGACACTCAGAGTGATGTCACAGACAACTTGGACCCTAGCCTGTGGTCTGATTTGAAGGATTTTGAGCTGTCCAAGTCATCCATTGCTCCCATAATAAAGATGGCATCATCTGATAATGCAGATGCTGTGTATTCATGCACGGGCTCTCATTGTCTGGACATGGACTTTGGGGCATTTCCTTCTCATTTCTGCACCGACTTCCACTTTGGTCATGAAAGTCATCTGCTTTAA 942 0.4745 MSILCRESASEKRERVVRELVEGRECATKLKHLLQKPVGAEGYVSAEALLAEVQRSFTETLSLLTSSEADGGGSDEVAAASSNIDLRSEGSSESRKRSSPPLKDRRGSYRRRKTEHTWTNVSQNIEDNHAWRKYGQKEILNSKFPRNYFRCTRKFDQGCRATKQVQRMEENPDMYQITYIGLHTCTGAIKVPQMATCPDTWDSSHPDDSKVPQEQDHPPTGISSQTPTSVKQEYPKEDTQSDVTDNLDPSLWSDLKDFELSKSSIAPIIKMASSDNADAVYSCTGSHCLDMDFGAFPSHFCTDFHFGHESHLL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1704 313 MobiDBLite consensus disorder prediction 216 234 - -
Dod09g1704 313 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 299 IPR044810 GO:0003700
Dod09g1704 313 MobiDBLite consensus disorder prediction 198 248 - -
Dod09g1704 313 ProSiteProfiles WRKY domain profile. 120 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1704 313 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 7 299 - -
Dod09g1704 313 MobiDBLite consensus disorder prediction 68 117 - -
Dod09g1704 313 SUPERFAMILY WRKY DNA-binding domain 123 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1704 313 Gene3D WRKY domain 111 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1704 313 SMART WRKY_cls 125 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1704 313 Pfam WRKY DNA -binding domain 126 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1704 313 MobiDBLite consensus disorder prediction 89 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1704 Dod-Chr9 38763579 38766028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1704 12 274 WRKY Transcription Factor Family AT3G56400 36.644 1.04e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod09g1704 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1704 - - gmx:100170683 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1149 08 14729144 14740894 Dod09g1704 09 38763579 38766028 ECH
Dod09g1704 09 38763579 38766028 Dod09g1704 09 38763579 38766028 ECH