Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1701 ATGGAGAAAGAGAAGGAGAAGGAATTGCTCGAATTGTACGAGGCCGCAAGGAAGGCCGCTGATGCTGCGAGTTCTGCTGATGCAGGCAAACACGAGGAAACCCGATGCATCGATGCGCTCGAACAACTCAAGAAATTCCCCGTTAATTATAAGATTCTCGTCAACACCCAGGTGGGCAAACATCTTAAACGTCTCACAAAACACCCAAGGCAGAAAATTCAGGTGTTCGCTCATGATTTAATTGAGATTTGGAAAGATATAATTTTAAAGGAAACAAACAAAAATAAGAATGGGGGCTCTGATCATAAGGTTGAGTCAGCAAATGGAGAGAGAGCTACATCTGGGAAATTTCAGAGGAGTCCCTCAGTGAAGGTTGAGAGGAGTGAAGTTGTCAAGGTTGAGAAAATTGATAGGAATGGTACATCAAGGCCAAACTCAGAGAAGGCACAAAATGTGGATGTCAAAAGTGAGAAACTGATCGGGCTCAAAATGTCAAGGTGGAAAAGATAG 510 0.4333 MEKEKEKELLELYEAARKAADAASSADAGKHEETRCIDALEQLKKFPVNYKILVNTQVGKHLKRLTKHPRQKIQVFAHDLIEIWKDIILKETNKNKNGGSDHKVESANGERATSGKFQRSPSVKVERSEVVKVEKIDRNGTSRPNSEKAQNVDVKSEKLIGLKMSRWKR* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1701 169 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 6 157 - -
Dod09g1701 169 SMART TFS2_5 12 90 IPR003617 GO:0005634
Dod09g1701 169 MobiDBLite consensus disorder prediction 92 109 - -
Dod09g1701 169 Pfam TFIIS helical bundle-like domain 39 88 IPR017923 -
Dod09g1701 169 PANTHER TRANSCRIPTION ELONGATION FACTOR TFIIS 6 157 - -
Dod09g1701 169 MobiDBLite consensus disorder prediction 92 155 - -
Dod09g1701 169 ProSiteProfiles TFIIS N-terminal domain profile. 14 91 IPR017923 -
Dod09g1701 169 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 29 102 IPR035441 -
Dod09g1701 169 MobiDBLite consensus disorder prediction 122 142 - -
Dod09g1701 169 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1 103 IPR035441 -
Dod09g1701 169 CDD TFIIS_I 32 88 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dod09g1701 Med26 7.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1701 K03145 - gmx:100811982 204.527