Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1692 ATGTCCAAATTTGCTGGAAAGGATGCTTTCCACTTGAGGGTCAGGGTACATCCATTCCATGTTCTTAGGATCAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTTCAGACTGGAATGAGAGGTGCTTTTGGAAAACCACAGGGTACATGTGCTAGAGTGGCCATCGGTCAGGTACTTCTTTCTGTCCGATGCAAGGACGGCAACAGCCATCATGCACAAGAGGCCCTCCGTCGTGCCAAGTTTAAGTTCCCTGGCCGGCAAAAGATCATTGTTAGCAGGAAGTGGGGTTTCACCAAGTTTAGTAGAGCTGATTATCTCAAGTACAAGTCTGAGAACAGGATTGTGCCCGATGGTGTGAATGCAAAGCTTCTTGGGTGCCATGGACCGTTGGCTAACCGTCAGCCAGGAAGAGCATTTTTGCCAACCGCTGCTACTGCTTAG 444 0.491 MSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKYKSENRIVPDGVNAKLLGCHGPLANRQPGRAFLPTAATA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1692 147 Gene3D Ribosomal protein L10e/L16 1 103 IPR036920 GO:0003735|GO:0005840|GO:0006412
Dod09g1692 147 CDD Ribosomal_L16_L10e 1 91 IPR016180 GO:0003735|GO:0005840|GO:0006412
Dod09g1692 147 Pfam Ribosomal protein L16p/L10e 3 91 IPR016180 GO:0003735|GO:0005840|GO:0006412
Dod09g1692 147 PANTHER 60S RIBOSOMAL PROTEIN L10-LIKE 1 143 - -
Dod09g1692 147 ProSitePatterns Ribosomal protein L10e signature. 33 54 IPR018255 GO:0003735|GO:0005840|GO:0006412
Dod09g1692 147 SUPERFAMILY Ribosomal protein L16p/L10e 1 101 IPR036920 GO:0003735|GO:0005840|GO:0006412
Dod09g1692 147 Gene3D - 104 139 - -
Dod09g1692 147 PANTHER 60S RIBOSOMAL PROTEIN L10 1 143 IPR001197 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1692 Dod-Chr9 38691687 38692648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1692 1 145 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 86.207 8.75e-91 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1692 K02866 - gmx:100305619 288.885