Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1662 ATGGGTGCTGTTGTTGATTGTTATCCACCGCATCATGGTGGCGGTGGCGGTGAGGTGGCGGTCTTGTCTCTTAATTCGCTTCCTTTGGGCTTCCGATTTCGACCTTCCGACGAGGAGCTCGTTGATTACTACCTCAGACAGAAGATCAACGGCAATGGCGAAGAGGTTTGGGTTATCCGAGAAATTGATGTCTGCAAGTGGGAACCCTGTGATCTGCCTGATTTGTCAGTCATAAAGAACAAGGATCCAGAGTGGTTTTTCTTCTGTCCGCAGGACCGCAAGTATCCAAATGGGCACCGATTGAACAGAGCCACGAATAAAGGGTATTGGAAGGCAACAGGCAAGGATCGTAGGATCAAGTCTGGTTCCACCTTGATTGGAATGAAGAAGACTTTGGTCTTCTACACTGGCCGTGCTCCTAAAGGGAAGAGAACCAACTGGGTTATGCATGAGTATCGCCCCACCCTCAAGGAGCTTGATGGTACCAACCCTGGGCAGAATGCATATGTCCTTTGCCGATTATTCAGGAAACAAGATGAGAGTCTTGAAGCTTTAAACTGTGATGAAGTGGAGCAGACTGATTCAGCTCCAATGGCTGCCAATTACTCCCCTGAGGAAATTCAGTCTGACCAGGCTCTGGTTGTGGTATCACCATCACATGTCACAGAAGATGATAATAAGCGCCAGGCAGTTAACCCCGAGAACTCTGAGGAAATAATATCCAACGTTATAGCCCCACCTAACTGCCACAGCGATGGATATGATGCTTGTGATGCACTATGTCAAATTATAGAACCACCTGCTGAGCAGTTGGATTTCAGCATATATGATGACCCCAATGACAAGATAATAAATGACAAACTGTTCTCCCCACCCCATTACCATCTTCCGCCAGAATTATATTACCAAGCAAACGATGACTCAGATGGTCGTTACGGACTTCAATATGGTACAAACGAGACAATGATTCCAGACATTTTAGCTTTCGTTAATTCAGATGGGTTTGCCTATGAGGACCCCTACAATCAAATGCAGAACACCTCGTTCAATGTTACGCAAAGTGTATCAGGCAGTGACTCAGAGGTGGATGTGGTCAATATGACACGCATATACCCAACAAATGCTGTTTATCCAGATGAGGCAATTGACCTTCCTTCGGCGATGACTCCAGAATTTTGCAGCACCATCACCTCTGACTTTAGTGGTGATGAGCAGAAGAGCAATATTGGGTTATTTCAAAACAATGTCCAGATGCCTTCCTCTTCTGATGTTAGTATGGGCCAAGTGTACGGTGTATGCGATGATTATGAGCAATCAAGATACTCGAGTATTGCCGCTAGTGGTGATAAGGACCCAAGTATTACTGGAATCAAGATAAGGACTCGACAGGGACGAAACGAACAGCCAGCCATGAACACCCCAAGTCAAGGTGATGCTCAAAGGAGAATTCGCTTGTTGAAGACTATACTTGTCTCGAACAAGATGGCAATGATGGGGGTTGTGTGCAAGAGCATAATTCAAAACCAATCATTGCAGGGGAGAACAAAGCTTCTGAAAATTATGATGCTGATGAGAGTGCTACTGCAAACAATGTCAATGATCCCCAGGAGAAATCTGAGTCAACTGACAGTAGAAAGGTTTCTAAACAAGCTGCACATGCAGGTTCCATCTTGGGGTTAA 1680 0.4554 MGAVVDCYPPHHGGGGGEVAVLSLNSLPLGFRFRPSDEELVDYYLRQKINGNGEEVWVIREIDVCKWEPCDLPDLSVIKNKDPEWFFFCPQDRKYPNGHRLNRATNKGYWKATGKDRRIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFRKQDESLEALNCDEVEQTDSAPMAANYSPEEIQSDQALVVVSPSHVTEDDNKRQAVNPENSEEIISNVIAPPNCHSDGYDACDALCQIIEPPAEQLDFSIYDDPNDKIINDKLFSPPHYHLPPELYYQANDDSDGRYGLQYGTNETMIPDILAFVNSDGFAYEDPYNQMQNTSFNVTQSVSGSDSEVDVVNMTRIYPTNAVYPDEAIDLPSAMTPEFCSTITSDFSGDEQKSNIGLFQNNVQMPSSSDVSMGQVYGVCDDYEQSRYSSIAASGDKDPSITGIKIRTRQGRNEQPAMNTPSQGDAQRRIRLLKTILVSNKMAMMGVVCKSIIQNQSLQGRTKLLKIMMLMRVLLQTMSMIPRRNLSQLTVERFLNKLHMQVPSWG* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1662 559 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 22 472 - -
Dod09g1662 559 Pfam No apical meristem (NAM) protein 28 153 IPR003441 GO:0003677|GO:0006355
Dod09g1662 559 ProSiteProfiles NAC domain profile. 27 177 IPR003441 GO:0003677|GO:0006355
Dod09g1662 559 Gene3D NAC domain 36 181 IPR036093 GO:0003677|GO:0006355
Dod09g1662 559 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 22 472 - -
Dod09g1662 559 SUPERFAMILY NAC domain 22 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1662 Dod-Chr9 38397461 38401012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1662 19 219 NAC Transcription Factor Family AT4G35580 68.159 3.18e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod09g1662 NAM 5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1662 - - gmx:100777071 586.645