Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1646 ATGGGCGAGGTGGTGATGAGTAGTGTTGGTGGCGGAGACAGGTTGGTGGGAGTGGAGGAGGAGGTGGTGGTGGTGGAGAAGCAGAGGGAGGTGGAGGAAGGGGAAGAGACTACTGCGACTGAGAGTAGCAGAGGAGAAGAATTGAAGGGGCTGATGAGGTGGGAGAAGTTCTTGCCGAAAATGATTCTGAGGGTGCTGTTGGTTGAAGCTGATGACTCCACAAGGCAGATTATAGCAGCGCTTCTCAGGAAATGCAACTACAAAGTGGCTGCTGTTCCTGATGGCTTGAAGGCATGGGAAATACTCAAGGGAAGACCACACAATATCGATCTAATACTGACAGAAGTGGATTTGCCGGCCATATCTGGCTATGCACTTCTGACATTAATTATGGAGCACGATATTTGCAAAAATATACCTGTCATAATGATGTCCTCACAAGATTCAATTAGAACAGTTTACAATTGCATGTTGAGGGGTGCTGCTGACTATCTTGTCAAGCCCATCAGAAAAAATGAACTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCATCAACCAGTGGCATAAATGGCCCCCAAGATGAGAGTGTTGCGCAGCAGAAGGTTGAAGCCACTGCTGAAAACAATGATGCTAGTAATCGTTCGAGTGGTGATGCAGCTTGCATTCAGAGAAACAAGGAATTGATCGAGAAAGGAAGTGATGCACAGAGCTCTTGTACAAAGCCCGACTTGGAAGCTGAGAGTGGCCCTGTCGATAACATGCAGGAATTTGCTCCACTTAGATGCAGTGAATCATATCCAAGTGGAACAAAGACACAAGAAGTTGAAACAAGCATTCATTTAGGCCAGACATCAATCATGCAAGACAGTCACGCTGGAGGATTGGCTGTGGGTATCGGCAAAAGCGGTGAGGCAAGCACAACTAATGGCAAGGATGGTGATCCAGAGCATTTTAAGATTGGTAGCATCAGCGGTGAGGCTCATGACAATCACTATGTTCAAATTAGCTCTTCTAAGGAAGCTATTGACTTGATTGGAGCATTTCATACTCATCCAAACTGCAGTCTCAAAAGTTCCACAGTTAATTTCACAAGAAACTTTGACTGCTCTCCACGATTGGATCTTTCCTTGAGAAGAGCTAATCCCACCAACTTTGAGAATGAACTCACTGAAGAAAGGAACACCCTCCTGCATTCTAATGCTTCAGCTTTCAAGCGGTATACTAACAGGCAATTGCAAGCTCCACCTGCAATGCTAATTAACTTATCTGACCAACGAAGAGAACAGAGAACAAATGGTGAGAAAGGTATTTCCCATTTTGCTACTGGCTGTAACTCAGATAGTTCAACACCTAGTATGCAAAGGTGTATTATGTCTCCAGCTACACCCCAATCAAAAGAATCTGAAGCAGCCACTTCACACTCACAGCAAGGGCATTCTCGCCCAATCCCAGTAAAAGGTGTACGGTTCAATGATCTATGCACAGCCTATGGTTCTGTACTTCCTCCGATGTTTCGCACACAGTCAGGTCCACCATCAGTTCCAAGTCCAAGTTCAGTTGTGCTTCAGGAACCAGCGTTTCAAGTAAATGCCTTTTATCAGCCAAATGTGAAAGAATATAGTTCAGAGCAGCTTTATGAATCTCGAGGTCCTAATGGAAAGAGTGCCGCAAACGACATGGTGTACAAACAGGAGCACAAGCCAGAACATGCAGAGGATCGAGGGCATATCCCTCCAGCAACTGACCAAAGTGTGTCCAGTAGTTTCTGCAATGGAAATGCAAGCCATCTGACTAGCATTGGTTATGGGAGCAATTGTGGCAGTAACAGCAATGTTGATCAAGTTGCCCTTGTTAGAACAGCTTCTGAGGTTAAGAATGAAGACGTTGCAAACAATGCAAGTTCTCATCGATCTATCCAAAGAGAAGCAGCTCTAAACAAGTTCCGCATGAAAAGGAAAGAGAGATGCTATGAGAAGAAGGTTCGTTATGAGAGCAGAAAGAAACTAGCCGAGCAGCGTCCCAGAGTGAAAGGTCAATTTGTTCGCCAAGTGCATCCTGATCCTCTTGCTGCAGAAAACGATGGCAGAAATTACAATCCTTAG 2109 0.4514 MGEVVMSSVGGGDRLVGVEEEVVVVEKQREVEEGEETTATESSRGEELKGLMRWEKFLPKMILRVLLVEADDSTRQIIAALLRKCNYKVAAVPDGLKAWEILKGRPHNIDLILTEVDLPAISGYALLTLIMEHDICKNIPVIMMSSQDSIRTVYNCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSTSGINGPQDESVAQQKVEATAENNDASNRSSGDAACIQRNKELIEKGSDAQSSCTKPDLEAESGPVDNMQEFAPLRCSESYPSGTKTQEVETSIHLGQTSIMQDSHAGGLAVGIGKSGEASTTNGKDGDPEHFKIGSISGEAHDNHYVQISSSKEAIDLIGAFHTHPNCSLKSSTVNFTRNFDCSPRLDLSLRRANPTNFENELTEERNTLLHSNASAFKRYTNRQLQAPPAMLINLSDQRREQRTNGEKGISHFATGCNSDSSTPSMQRCIMSPATPQSKESEAATSHSQQGHSRPIPVKGVRFNDLCTAYGSVLPPMFRTQSGPPSVPSPSSVVLQEPAFQVNAFYQPNVKEYSSEQLYESRGPNGKSAANDMVYKQEHKPEHAEDRGHIPPATDQSVSSSFCNGNASHLTSIGYGSNCGSNSNVDQVALVRTASEVKNEDVANNASSHRSIQREAALNKFRMKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHPDPLAAENDGRNYNP* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1646 702 MobiDBLite consensus disorder prediction 437 482 - -
Dod09g1646 702 SUPERFAMILY CheY-like 63 189 IPR011006 -
Dod09g1646 702 SMART REC_2 63 178 IPR001789 GO:0000160
Dod09g1646 702 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 675 IPR045279 GO:0009736
Dod09g1646 702 MobiDBLite consensus disorder prediction 568 589 - -
Dod09g1646 702 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 25 675 - -
Dod09g1646 702 Pfam Response regulator receiver domain 65 176 IPR001789 GO:0000160
Dod09g1646 702 MobiDBLite consensus disorder prediction 185 220 - -
Dod09g1646 702 CDD psREC_PRR 65 168 - -
Dod09g1646 702 MobiDBLite consensus disorder prediction 669 702 - -
Dod09g1646 702 ProSiteProfiles CCT domain profile. 643 685 IPR010402 GO:0005515
Dod09g1646 702 Pfam CCT motif 643 685 IPR010402 GO:0005515
Dod09g1646 702 MobiDBLite consensus disorder prediction 427 487 - -
Dod09g1646 702 Gene3D - 61 278 - -
Dod09g1646 702 ProSiteProfiles Response regulatory domain profile. 64 182 IPR001789 GO:0000160
Dod09g1646 702 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1646 Dod-Chr9 38216842 38221713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1646 338 687 Response Regulator Gene Family AT5G24470 32.500 1.51e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dod09g1646 Response_reg 5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1646 K12130 - gmx:100777119 1042.72