Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1645 ATGATCACGTCTCTGGAGAAGAAGATGAGGTACTTGATAGAGGAGAGGGACCGTGACATTGAGGAGCTGCTGGTTTTTCCAGCTTTCCTTGGTTACAAGTTTGATGACAGAATTAAGCATAGGTTTGAAGCAATGAAGAGTGTGAAGGGAGGAAGAATGCCTCTCAATGAGCTTCTAACTGTTTCAACTGAGGGATTCACTAGCAAAAGAAAAAAGGCCTCTGCTATAAAGACCAGACACTCTGAAATGTAG 252 0.4286 MITSLEKKMRYLIEERDRDIEELLVFPAFLGYKFDDRIKHRFEAMKSVKGGRMPLNELLTVSTEGFTSKRKKASAIKTRHSEM* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1645 83 PANTHER CGI-12 PROTEIN-RELATED 3 74 IPR003690 GO:0003690|GO:0006355
Dod09g1645 83 Pfam mTERF 3 66 IPR003690 GO:0003690|GO:0006355
Dod09g1645 83 Gene3D Transcription termination factor 3, mitochondrial 2 77 IPR038538 -
Dod09g1645 83 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 3 74 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod09g1645 mTERF 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1645 - - pvu:PHAVU_009G045200g 103.605