Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1643 ATGGCTTGTTCTCCCTCACCAAAAGCATCATCAAATCACAACCATCAACCAAGGAGGGTCTCCATCCCACCGCTCATGCGGTCTTCCGGTGTCGCTCCATTGCCTCCATCGCCAGCCCCTAACTTGGTGAATAAACTCTCACACTTAATTTCTCAAAAACCTATCCTACGGTACTGCCTCTGTCTTACTGTGTTCATTTCAGGGACGCTCTTCTCTTTGTTTGCAGAAATGGGTATTGGCTTTGAGGAAACGGAGCTTTTCTTTATCAACAACCCTGACCTCACAATTGTCTCAGTGGATTCACTGCGTGAAAGGGTTCTTTCATTGCAGTCTATGGGGCTTGACCGTGTTGACATCTACTACTTGGTCACAAGGCGCCCCACCATGTCAACAGCCAAAGAAATCGACCCATTGTTGAGTTTTCTGAGAGATGAGTTGAAAGGAGAGCTTGAGCTGGCAGAGATGAAGCGTCTCTTGTCTTCTACAGAACCAAGATTCTTTATGGGGTTCCCTCAGAAGGTGGAACTGGTTGTAGAAAAAGGTGTTCCACCTGACAAGATTGTTCATGTGCTCAACAAGTTGAACTTGCCAAAAGCACTGTGTCATAGGTTAGTGGGTGAGATTGAAAGGATCATGGATTTCTTAGAGCCCTTTGGTGGCGTTGGTTTGATTTTGAGGCGCCCTGCCATTCTCAACTATGATTTCGATAACCAGCTGATTCCAAGGGTTAATTTCCTGATTGAACTTGGCCGAGGGGATGAGGATGGCACTGGGAAAGTGCTGCAAAAATTCCCAACAATTTTGAATTACAGCGTGGACCATTTGGAAGCACATGTGGAGTTTCTCGGGTCTTTTGCAGGCGTTGATGACAAACAAATATTTAGGATAGTGCTTGTGTTTCCGAGTATTTTTACAGCTAGCAGAGAAAAGAAACTGTATCCCAGGATACGGTTCCTCAAGGAATGTGGGTTGGATTCTGGTGATGATATCTTTTAA 996 0.4528 MACSPSPKASSNHNHQPRRVSIPPLMRSSGVAPLPPSPAPNLVNKLSHLISQKPILRYCLCLTVFISGTLFSLFAEMGIGFEETELFFINNPDLTIVSVDSLRERVLSLQSMGLDRVDIYYLVTRRPTMSTAKEIDPLLSFLRDELKGELELAEMKRLLSSTEPRFFMGFPQKVELVVEKGVPPDKIVHVLNKLNLPKALCHRLVGEIERIMDFLEPFGGVGLILRRPAILNYDFDNQLIPRVNFLIELGRGDEDGTGKVLQKFPTILNYSVDHLEAHVEFLGSFAGVDDKQIFRIVLVFPSIFTASREKKLYPRIRFLKECGLDSGDDIF* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1643 331 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 74 331 - -
Dod09g1643 331 Pfam mTERF 72 325 IPR003690 GO:0003690|GO:0006355
Dod09g1643 331 MobiDBLite consensus disorder prediction 1 22 - -
Dod09g1643 331 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Dod09g1643 331 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Dod09g1643 331 SMART mt_12 85 115 IPR003690 GO:0003690|GO:0006355
Dod09g1643 331 SMART mt_12 221 252 IPR003690 GO:0003690|GO:0006355
Dod09g1643 331 MobiDBLite consensus disorder prediction 1 18 - -
Dod09g1643 331 Gene3D Transcription termination factor 3, mitochondrial 222 329 IPR038538 -
Dod09g1643 331 PANTHER CGI-12 PROTEIN-RELATED 74 331 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod09g1643 mTERF 1.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1643 - - pvu:PHAVU_009G045200g 321.242