Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1635 ATGGGTACCAGCGAGTTGGGTTGCACCTACGCCGCTCTCATTCTCCACGATGATGGAATCCCAGTCACCGCGGAGAAGATTAGCACTATTTTGAAGGCAGCTAATGTCGCCGTGGAAGCGTTCTGGCCCAGCCTCTTCGCTAAGCTTGCACAGAAGAGAAACATCGACGACATCATCTTGAATGCTGGATCTGGAGGTGGTGCCGCTGTCGCCGTCGCCGCTCCTGCTGGTGGTGCTGCCGCTGGTGGAGGCGCCGCTGCCGACGCTGCCCCTGCTAAGGAGGAAAAGAAGGAGGAGCCAAAGGAAGAGAGTGATGATGACATGGGTTTCAGCTTGTTTGATTAG 345 0.5623 MGTSELGCTYAALILHDDGIPVTAEKISTILKAANVAVEAFWPSLFAKLAQKRNIDDIILNAGSGGGAAVAVAAPAGGAAAGGGAAADAAPAKEEKKEEPKEESDDDMGFSLFD* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1635 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 114 - -
Dod09g1635 114 Pfam 60s Acidic ribosomal protein 22 113 - -
Dod09g1635 114 Gene3D - 2 63 IPR038716 -
Dod09g1635 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 114 - -
Dod09g1635 114 MobiDBLite consensus disorder prediction 78 114 - -
Dod09g1635 114 Hamap 50S ribosomal protein L12 [rpl12]. 6 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Dod09g1635 114 MobiDBLite consensus disorder prediction 90 108 - -
Dod09g1635 114 CDD Ribosomal_P1 5 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1635 Dod-Chr9 38150211 38152091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1635 1 114 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 56.140 7.30e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1635 K02942 - mnt:21386797 125.176