Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1633 ATGGCTAGAGCTGGAAAACAAGGTCCTTTCTTCGAATTCGATAGCCAAGGAAGAGTGAATGTAGACTGTGGCTCGGGACTAGGGTTGAAGTATGAGGTGAATCTATGGATTGTGGGCCCTAAAAGTTCCATTATTGCATCTTCATCACAGTTATTTGAAAACGGTTCATCATACTTGCGTGTGAACTTCCCCCACCCCATCATTCCCCGTCAATTGTTGGGCAGAATGATGCCACAAGTTATAGCATATGCCAAGAATTTGCTTGAAAATTATTGCCCTTCTTCTGGTCTTCATTACGAAAGTGGCAGCTTCCGTTTGTTCAAATTGGTTTTGAATATTCAGGTTGAAATACCACACGATAATATGGTCTTGGAAGAGCCCTCCGCGAGATTGAAGAGTGCAGTTGAGTGGCCCAAGAAGGGAGTGAATCTTGAAAAAGGCGGCACCCAAGAAAGTTATTTGAAAACGGCCCATCGTACGTGCGTGTTCACCTTCCCCCACCCCATCATTCCCCGTGAATTGATAGTCCAGATGATGCCCGAAGTTATAACTTATGCCAAGAATATGCTTGAAAATTATAGCCCTTCTTCTGGTCTCCATTACGAAAGTGGCAACTTTCGTTTGTTCAAATTGGTTTTGAATATTGTGGTTCAAAAACCATATGATGAAATCTACAGTATGATCTTGGAAGACCCCGAGAGATTGAATGCCACCGTTGAATCGCTCAAGAAAGTGAATCTTGGAGGAGTTGCTGCCAAGGAAAGGTGCAGTATTTGTCTTGTGGAGTTCAGCGATGGCATGCAGGTTTCAGCCATGCCATGCACGCATAAGTATCACCAAGAATGCATCAACGTGTGGCTAGAAACAAGTTATACGTGCCCTCTGTGTCGCCAACCTTTGGTTAAGCTCACCAGCCAGGATCAACATGCTGCTGGAGATTTGAAGCCAGTACGAATGAAAAAGTGGTCGGAGATTTGA 978 0.4427 MARAGKQGPFFEFDSQGRVNVDCGSGLGLKYEVNLWIVGPKSSIIASSSQLFENGSSYLRVNFPHPIIPRQLLGRMMPQVIAYAKNLLENYCPSSGLHYESGSFRLFKLVLNIQVEIPHDNMVLEEPSARLKSAVEWPKKGVNLEKGGTQESYLKTAHRTCVFTFPHPIIPRELIVQMMPEVITYAKNMLENYSPSSGLHYESGNFRLFKLVLNIVVQKPYDEIYSMILEDPERLNATVESLKKVNLGGVAAKERCSICLVEFSDGMQVSAMPCTHKYHQECINVWLETSYTCPLCRQPLVKLTSQDQHAAGDLKPVRMKKWSEI* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1633 325 CDD RING-H2_PA-TM-RING 256 297 - -
Dod09g1633 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 306 IPR013083 -
Dod09g1633 325 SMART ring_2 256 296 IPR001841 -
Dod09g1633 325 Pfam Ring finger domain 255 297 IPR001841 -
Dod09g1633 325 ProSiteProfiles Zinc finger RING-type profile. 256 297 IPR001841 -
Dod09g1633 325 SUPERFAMILY RING/U-box 255 304 - -
Dod09g1633 325 PANTHER SI:CH211-59O9.10 238 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1633 Dod-Chr9 38135069 38140621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1633 243 308 C3H Transcription Factor Family AT1G18760 43.939 3.42e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1633 - K11982 aprc:113870408 121.324