Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1624 ATGCTGCTTAATTTAGTGTTTGGAGTTATTATGATGGGTGAATTTGGCGTTTCAGACAAGGAAGCTAAAAAAAATAGCACCAGTGCTATTCCTACAACTACTAGTGTTCTGGGGTTGGGTAGTGTGAAGGTGCAGAAGCAGCAGCAGCAGCAACAGCATACCCTTGAAGCATTCCCTAGTTATAAGACGACCATGATGATGATGCTGCATCATAATCATCACCACCGTCCATTGTCACCCTTTGATAATACTACTAATAATAATAGTGATTCCTGTGCTGCTGGTGATGGTGATGGTCCCACGACTCAGGACACGTCTTTGACTAATCATCATCATCATATAAACGCTGCTCTTAGTGGTGTTCCTGCTCTTGGCGCTGCTATTGATGCTGTAAGACCTTTGCAGCCTTTTGACAATATTTCTGCTTATACTCCTGCTACCACCACAACCACTCGCTCTGCCTTCAAATCCCCAGCAGGTGGGATGGCGGCTTCTTTGGGGCTCCCTTTCACAAGTGCACAATGGAAGGAGCTTCAGAGACAAGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCTGAACTCCTTATCCCCTCTTCACTCACGCCTGCTTCTTCTCGCTCTCATTTGGATGGTGGTTTCAATCTGAGGCTGTCAAGCAGCACTGATCCGGAGCCAGGTAGGTGCAGGAGAACGGATGGTAAGAAGTGGAGATGTTCTAGAGATGTGGCTCCTAACCACAAGTACTGCGAGCGCCATATGCATAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCACACCAACAACACCACCACCACCACCATTAATAGCAATATTAATAGCCACCAGCTACTCAAGAGGGCTCGCCATGATTGCGACCCTTTTCCTACCTCTGGTGTTACTGTGGCTATTTCTAACCCCACAACAAGGAGAGATGGATCTTCATCCCATTTTCTTGCTGCTTCTACTACCACTCAGCCATACCTTGAATCTTCCCTTTCTCTTGACAACTTTGGTGTGAAAGCTGCTAATTTTGAATCAGTGGCTTCTGTTTCTTCATATAAGGAACCCAGGGGCTTGGACTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGAGTCAGAATGGCAGTCTCTGATGCATAACAAAGTTGGCTTGAATGCTATGAGTTCCTGCAGTGACACCGAGTCTCACTGTCTAAACTCGTTTGCACTGTATAGTACTGGATTGGAACCACAGAGTAGACGCCCTGCTATGTTCCTTAATCCTCTTCTTGTTCCTATGGAAAGTCTTCAATCTGAGAAACCAAGGGGTTTCATTGATGCCTGGTCTAACGCAGCAACAGAACAAAGCAATGCCGACAAGACGAACTGTGTTGCACCAATTGGCAAATTATCCCTCTCCTCTCTTGATCTATCAATGGGAGGTGGGTCTGTGCATGAAGACCTGAGTACTAGTGAGGTTGGTTTGGGCCTAATGGAGCCTGATGGGAGCACACACAATGCCAATGACACTAAAACCAATCTCTCGAACTGGCTCACTCCAACTCCTTGGGTGGCTCCAACACCTGGTGGTCCACTAGCTGAAGTTCTAAGGCCAAGCACAGTCACTGCCACCATTGATGCTGCCTCCAATTCCAGTCCATCCTCGCCTGTCATGGCACATGCTGAATCCACCAGCAGCCCTCTGGGAGGGACAATGGTCTCATCTCCATCTGGGGTCCTGCACAAAACACTTGCTTCATTGTCTGATAGTAGTAGCAATAGCAGCCCAACGGTTGCATCATCCAGGGCTAATTCCGAGTTTGCCTTGCTTAGGTTCAATCAAAAGTAA 1854 0.4741 MLLNLVFGVIMMGEFGVSDKEAKKNSTSAIPTTTSVLGLGSVKVQKQQQQQQHTLEAFPSYKTTMMMMLHHNHHHRPLSPFDNTTNNNSDSCAAGDGDGPTTQDTSLTNHHHHINAALSGVPALGAAIDAVRPLQPFDNISAYTPATTTTTRSAFKSPAGGMAASLGLPFTSAQWKELQRQAMIYKYMMASVPVPPELLIPSSLTPASSRSHLDGGFNLRLSSSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVHTNNTTTTTINSNINSHQLLKRARHDCDPFPTSGVTVAISNPTTRRDGSSSHFLAASTTTQPYLESSLSLDNFGVKAANFESVASVSSYKEPRGLDWMLNGDPISLGASESEWQSLMHNKVGLNAMSSCSDTESHCLNSFALYSTGLEPQSRRPAMFLNPLLVPMESLQSEKPRGFIDAWSNAATEQSNADKTNCVAPIGKLSLSSLDLSMGGGSVHEDLSTSEVGLGLMEPDGSTHNANDTKTNLSNWLTPTPWVAPTPGGPLAEVLRPSTVTATIDAASNSSPSSPVMAHAESTSSPLGGTMVSSPSGVLHKTLASLSDSSSNSSPTVASSRANSEFALLRFNQK* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1624 617 MobiDBLite consensus disorder prediction 549 607 - -
Dod09g1624 617 PANTHER - 130 606 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dod09g1624 617 Pfam WRC 227 269 IPR014977 -
Dod09g1624 617 MobiDBLite consensus disorder prediction 74 107 - -
Dod09g1624 617 MobiDBLite consensus disorder prediction 216 236 - -
Dod09g1624 617 PANTHER GROWTH-REGULATING FACTOR 7 130 606 - -
Dod09g1624 617 Pfam QLQ 169 201 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod09g1624 617 ProSiteProfiles WRC domain profile. 226 270 IPR014977 -
Dod09g1624 617 ProSiteProfiles QLQ domain profile. 169 204 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod09g1624 617 MobiDBLite consensus disorder prediction 79 107 - -
Dod09g1624 617 SMART QLQ_2 168 204 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1624 Dod-Chr9 38012568 38015903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1624 439 594 GRF Transcription Factor Family AT5G53660 34.940 1.34e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod09g1624 WRC 6.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1624 - - gmx:100803096 673.315