Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1620 ATGGGCCATTGCTGCAGCAAGAGCGTCGCCGTCAACAACGACACCGCCTCCCCCGATCACCGCTTCAAGCATCCGCACACCGCGGCGTCGCCGGCGGCCACATCCGCCGTGAACAACTCCGTCTCCGGCGTCAGCGACGCCACCACGACGACCACCCCCGGAAGGAGCACTCCGGCGAACTCGTTCTCGACGAGTCCATTCATGAGCCCGCTGCCTCCGGGGGTGGCGCCGTCGCCGGCGAGGACCCCAGGGCGGAAATTCCGGTGGCCGCTGCCTCCGCCTTCGCCGGCAAAGCCGATCATGGCGGCGCTGCTGCGGCGGCAGGGGAAGACGAAACCGAAGGATGGGCCGATACCGGAGGAGCAAGGTGAGGGCGGGGGCGGTGGCGGCGGCGGAGATGGAGGAGCAGAGAGGTCTCTTGATAAGAGCTTTGGGTATGGGAAGAACTTTGGGGCGAGGTTCGAGGTTGGGAAGGAAGTGGGTCGAGGGCATTTTGGTCATACTTGTTGGGCCAAAGGGAAGAAGGGTGACCTTAAGGGCCAATCAGTGGCCGTTAAGGTCATATCCAAAGCAAAGATGACTTCAGCTATAGCAATTGAAGATGTACGGAGAGAGGTCAAAATGTTGAAGGCCTTATCTGGACATAAGAATTTGGTGAAGTTTCATGATGCATTTGAGGATGTCAATAACGTCTACATAGTAATGGAGTTGTGTGAGGGTGGAGAACTACTTGACAGAATTCTAGATAGAGGTGGAAGATACACAGAGGAAGATGCAAAAGCTATTCTTGTACAAATTCTAGATGTAGTTGCCTTTTGTCATCTTCAGGGAGTTGTTCATCGCGATCTAAAACCTGAGAATTTCCTTTTTGTCTCAAAAGATGAGGATGCTGTGATGAAAGCTATTGATTTTGGTCTATCTGATTTTGTTAGGCCAGAACAACGCCTCAATGATATTGTTGGGAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGACTTGTGGAGTATTGGAGTTATATCATACATACTGTTATGTGGAAGTAGACCATTTTGGGCACGCACTGAATCAGGAATATTCCGGTCTGTGTTACGAGCAAATCCTAACTTTGACGATACGCCTTGGCCATCAATATCACCAGAAGCTAAAGATTTTGTGAAGAGACTATTGAACAAGGACCACAGGAAAAGGATGACTGCTGCCCAAGCTTTAACTCACCCTTGGTTAAGGAATGAAAAAATTACTATACCTTTAGATATTTTGATTTTCAAGTTAGTCAAGTCATATGTTCGTGGGTCACCTTTCAAACGAGCGGCATTGAAGGCTCTCTCAAAAGCATTGACGGAAGATGAGCTTATCTACCTTAGAGCACAGTTTAACCTCTTGGAACCAAGAGATGGTTGCATTTCACTTGATAATTTTAGAGTGGCTCTTATGAAAAACGTAACTGATGCCATGAAAGAAGCAAGGGTCCCTGACATTTTAAATTTGATGGAGCCACTCTCCTTGAAAAAGATGGACTTCGAAGAGTTTTGCGCAGCTGCAATCAGTGTATACCAGCTGGAGGTTCATCAAGAATGGGAGAGAATTGCTACCACAGCTTTTGAGTATTTTGAAGAGAATGGAAACCGAGTCATTTCAGTTGAGGAGTTGGCTCAGGAGATGAATCTGGGGCCATCAGCTTACTCTCTAATGGGTGATTGGATCAGAAGATCTGATGGAAAACTCAGCTTTGTGGGATATACAAAGTTTTTGCACGGTGTCACGCTTCGCAGTTCAAACACAAGACACCGGCAAGTAGTATAG 1827 0.4828 MGHCCSKSVAVNNDTASPDHRFKHPHTAASPAATSAVNNSVSGVSDATTTTTPGRSTPANSFSTSPFMSPLPPGVAPSPARTPGRKFRWPLPPPSPAKPIMAALLRRQGKTKPKDGPIPEEQGEGGGGGGGGDGGAERSLDKSFGYGKNFGARFEVGKEVGRGHFGHTCWAKGKKGDLKGQSVAVKVISKAKMTSAIAIEDVRREVKMLKALSGHKNLVKFHDAFEDVNNVYIVMELCEGGELLDRILDRGGRYTEEDAKAILVQILDVVAFCHLQGVVHRDLKPENFLFVSKDEDAVMKAIDFGLSDFVRPEQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDTPWPSISPEAKDFVKRLLNKDHRKRMTAAQALTHPWLRNEKITIPLDILIFKLVKSYVRGSPFKRAALKALSKALTEDELIYLRAQFNLLEPRDGCISLDNFRVALMKNVTDAMKEARVPDILNLMEPLSLKKMDFEEFCAAAISVYQLEVHQEWERIATTAFEYFEENGNRVISVEELAQEMNLGPSAYSLMGDWIRRSDGKLSFVGYTKFLHGVTLRSSNTRHRQVV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1620 608 SUPERFAMILY EF-hand 449 594 IPR011992 -
Dod09g1620 608 ProSiteProfiles Protein kinase domain profile. 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1620 608 Gene3D Transferase(Phosphotransferase) domain 1 244 424 - -
Dod09g1620 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Dod09g1620 608 ProSitePatterns Protein kinases ATP-binding region signature. 160 186 IPR017441 GO:0005524
Dod09g1620 608 SUPERFAMILY Protein kinase-like (PK-like) 153 437 IPR011009 -
Dod09g1620 608 PANTHER SERINE/THREONINE-PROTEIN KINASE 56 599 - -
Dod09g1620 608 Pfam Protein kinase domain 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1620 608 CDD STKc_CAMK 153 415 - -
Dod09g1620 608 Gene3D Phosphorylase Kinase; domain 1 156 243 - -
Dod09g1620 608 MobiDBLite consensus disorder prediction 16 140 - -
Dod09g1620 608 Gene3D - 425 595 - -
Dod09g1620 608 SMART serkin_6 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1620 608 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 56 599 - -
Dod09g1620 608 MobiDBLite consensus disorder prediction 31 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1620 Dod-Chr9 37969067 37976830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1620 1 599 EF-hand Containing Proteins AT3G50530 57.944 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod09g1620 Pkinase 5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1620 - - gmx:100794478 1035.02