Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1608 ATGGGTGGTTCATCAGATACGAAGTTCCTGCAAGATTTGCTGTTGTACGCAGCGAGCGCTGCCATGAGTTGCCTTGTGTTGTTCGTGGGGCTCCGACACCTCGACCCGACCCGAGAGGCTTCAAAGAAGGCCCTTGAGCACAAGAAAGAGATTTCCAAGCGTCTTGGTCGCCCTCTCATTCAGACTAACCCTTACGAGGATGTTATAGCCTGTGATGTTATAAATCCTGACCACATTGATGTGGAGTTTGACTCTATTGGGGGCCTGGAAACAATCAAGCAATCGCTGTTTGAGCTTGTTATTCTGCCTCTGAAAAGACCTGACTTGTTCTCTCATGGTAAGCTTCTTGGGCCGCAAAAGGGGGTCCTGTTGTATGGGCCTCCTGGCACTGGAAAAACCATGCTTGCCAAAGCTATTGCTAAGGAGTCGGGAGCTGTTTTTATTAATGTGAGGATATCAAACTTGATGAGCAAGTGGTTTGGTGATGCCCAAAAGCTTGTGGGTGCTGTATTTAGCCTGGCTAATAAGCTCCAGCCAGCCATCATATTTATTGATGAAGTTGACAGTTTTTTGGGTCAACGTCGTACAACAGATCATGAGGCTTTGTTAAATATGAAAACTGAGTTCATGTCTCTTTGGGATGGATTTACCACTGATCAGAATGCTCGAGTTATGGTCCTTGCAGCTACCAATCGTCCTTCGGAACTTGATGAAGCAATACTCCGGCGTCTTCCACAAGCTTTTGAAATTGGAATGCCTGACCAGAGGGAGAGGGCTGAGATATTGAAGGTTATCTTGAAGGGAGAGAGGGTAGACGATAACATAGACTTTGCTTATGTAGCTGGCTTATGTGAGGGTTACACCGGGTCAGATCTATTTGATCTCTGCAAGAAGGCTGCCTATTTTCCTATTAGAGAACTACTGGATGAAGAGAAGAAAGGGAAACGATCTTCTGTGCCCAGACCTTTGTCACAGTTAGATTTGGAGAGGGCCCTTGCCACTTCACAGAAGACGAAGGTTGCTGCAAGTGCATATGGAGGAATTAACATGCAGTCATCACCAAGATGGCAGAGTGAGTCAGGTGATTATCAGCTTCAAGCTGCAATCAATGAAATTTCTAAGCTTGTGGTTTCTCACATGATTAACATCCAATCAGATACGCAGGATTCCTAA 1173 0.4569 MGGSSDTKFLQDLLLYAASAAMSCLVLFVGLRHLDPTREASKKALEHKKEISKRLGRPLIQTNPYEDVIACDVINPDHIDVEFDSIGGLETIKQSLFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVGAVFSLANKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGMPDQRERAEILKVILKGERVDDNIDFAYVAGLCEGYTGSDLFDLCKKAAYFPIRELLDEEKKGKRSSVPRPLSQLDLERALATSQKTKVAASAYGGINMQSSPRWQSESGDYQLQAAINEISKLVVSHMINIQSDTQDS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1608 390 CDD AAA 116 251 - -
Dod09g1608 390 SMART AAA_5 118 254 IPR003593 -
Dod09g1608 390 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 3 378 - -
Dod09g1608 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 310 IPR027417 -
Dod09g1608 390 Pfam AAA+ lid domain 274 310 IPR041569 -
Dod09g1608 390 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Dod09g1608 390 Gene3D - 253 333 - -
Dod09g1608 390 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 3 378 - -
Dod09g1608 390 Gene3D - 80 337 IPR027417 -
Dod09g1608 390 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1608 Dod-Chr9 37859642 37864316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1608 81 316 Calmodulin-binding Proteins AT3G56690 34.298 4.02e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1608 K22530 - gmx:100796908 692.189