Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1607 ATGAAGCCTTGGCTTTGGCTTTGGCCTTGGGCCACCACCATCACCTCCCTCATCTTCATCTTCCTAATCCTCCGCTTCTTCCGCAAAACCTCAGCGCTCCAAATCCTCAAGAAATGGTGGCTCTCCTTCGAGGACCGCCTCCACGTCCACCAGTCCTTCAAAGTCCCTCTCTACAACCACCATTTCCAGGAGAACCAACTCTACCGCAAAATCATCACCTACCTTGATTCCCTCCCTTCTGTTCAAGACTCCGATTTAACCAACCTCTTCTCCGGCCCCAAACCCTCCGATATCTACCTCCACCTCGACGCCAACCAAACCGTCCATGACACCTTCCTCGGTGCCAAGCTCTCCTGGACCAACGACGCCGCCGCCAACGGAGACTCCAATTCCGCCGCGCTCGTCCTCCGTATCAAGAAGAAGGACAAGCGCAGGGTTTTCCGCCAGTACTTCCAGCATATTCTCTCCGTCGTGGACGAGATCGAGCAGCGGAGGAAGGAGATCAGGCTGTACACGAACTCCGGCGCCGGTGAATCCTCGCGGTGGCGATCGGTGCCGTTCACGCATCCGGCGAGCCTCGAAACAGTGGCGATGGACGCTGAGCTGAAGAACAAGGTGAAATCGGATCTGGATCAGTTCCTCAAGTCGAAGCAGTACTACCACCGGTTAGGGCGCGTTTGGAAGCGGAGCTACCTCCTCTACGGTGCGTCCGGAACGGGGAAATCGAGCTTCATCGCCGCGATGGCGAAGTTCCTCTGCTACGACGTGTACGACATCGACGTGTCCAAGGTAACGGACGGCTCCGATTGGAAGACGCTGCTGATGCAGACGACGAGCAAGTCGATGATCGTGATCGAAGATCTCGATCGGTTGCTCCAATCGGCCGGGAAATCAATGAGCCTTTCGAGCGTGTTGAACTTCATGGATGGCATCGTTTCGTGCTGCGGCGAGGAGCGCGTGATGGTGTTCACGATGAACGGCACGAAGGATGAGGTGGATCAAGCGGTGCTGAGGCCAGGGAGGGTTGACGTTCACATACACTTCCCCTTATGCGATTTCTCCACCTTCAAGATTCTGGCGAGTAGTTATTTAGGGCTTAAGGAGCACAAGCTTTTCCCTCAGGTGGAAGAGGTTTTCCAGACCGGGGCCCGTCTCAGCCCGGCCGAGGTCGGTGAGATCATGATATCGAACCGGAACTCACCGACCCGGGCCTTGAAAACCGTTATAACGGCCTTGCAGGTTCACTCCAACCAGAACAAGTTGAGTGAGAGCGGCTCCGGTAGGAGCAGCGATGATAATGAGGCCGGAGCTGTGATATGTAGGGAGAGTGTTCACACAGTGAGGGAGTTCCGCAAGCTGTATGGGCTTTTGCGTTTAGGGAGTAGGAGGAAGGAGGAGAAGGAGAACCCAGATTCCGGGCCCTCTGAGAAAGAGACTCCACGGATCGAGGGTCGGGTCGGTTGA 1464 0.5601 MKPWLWLWPWATTITSLIFIFLILRFFRKTSALQILKKWWLSFEDRLHVHQSFKVPLYNHHFQENQLYRKIITYLDSLPSVQDSDLTNLFSGPKPSDIYLHLDANQTVHDTFLGAKLSWTNDAAANGDSNSAALVLRIKKKDKRRVFRQYFQHILSVVDEIEQRRKEIRLYTNSGAGESSRWRSVPFTHPASLETVAMDAELKNKVKSDLDQFLKSKQYYHRLGRVWKRSYLLYGASGTGKSSFIAAMAKFLCYDVYDIDVSKVTDGSDWKTLLMQTTSKSMIVIEDLDRLLQSAGKSMSLSSVLNFMDGIVSCCGEERVMVFTMNGTKDEVDQAVLRPGRVDVHIHFPLCDFSTFKILASSYLGLKEHKLFPQVEEVFQTGARLSPAEVGEIMISNRNSPTRALKTVITALQVHSNQNKLSESGSGRSSDDNEAGAVICRESVHTVREFRKLYGLLRLGSRRKEEKENPDSGPSEKETPRIEGRVG* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1607 487 Gene3D - 348 414 - -
Dod09g1607 487 Pfam Domain associated at C-terminal with AAA 33 120 IPR025753 -
Dod09g1607 487 SMART AAA_5 227 352 IPR003593 -
Dod09g1607 487 Pfam ATPase family associated with various cellular activities (AAA) 232 350 IPR003959 GO:0005524|GO:0016887
Dod09g1607 487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 412 IPR027417 -
Dod09g1607 487 CDD AAA 228 350 - -
Dod09g1607 487 PANTHER BCS1 AAA-TYPE ATPASE 14 439 - -
Dod09g1607 487 MobiDBLite consensus disorder prediction 461 487 - -
Dod09g1607 487 Gene3D - 183 347 IPR027417 -
Dod09g1607 487 PANTHER BNAANNG18710D PROTEIN 14 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1607 Dod-Chr9 37854200 37856381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1607 223 348 Calmodulin-binding Proteins AT3G56690 25.714 1.30e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1607 - K08900 gmx:100819885 756.133