Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1593 ATGGGTAGCTTCAGTGAAGACGAAGAATGTCGGTTTTTCGATGCTCAAGAGGATGTTGTGTCCATTGCCGATGCAGTATCCGATGGCACTGGCACCCTTGACACCACTTCCACTTCTAAAGAAGGAGTGTTCACTGGTTTTGACTATGAAGTGTGGATTCGGAGCCCAAGGAGTGTCCAGGAGCGTAGGAGCAAGTTTATGAAGAGCATGGGACTGCGTTTGAATAGGGTTGGTCTTGAAAATTCAGTAGATGTGTTTAGTGTTGAGCAGGAAGAGGTGGCGGATAGAGTGGGAGATAGTGGTGGGGCCGTGACCAGAACTTGTGGTTTTGAAGATGAGTTCTGTTCAACTCAGTCCGCGATGTCTTGTTTGTCCACTATGAATTCTTCAGAGGACTTCGGTTTGGTGGAGAACATGGCATGCCAAGATGAGAATTTGGAGAGGGCAGTGGGGCGTAATTCGGATAAGGAGGGGCAGCATAGGAGGATGAGTGATGGTAGAGATGTGGGTCTGGATCGGTTGGTGAATGCTGGGGGACCTAACGATTCTGGGAGCACCTCTCCTTCTTTCCAACGCTTGGAGAGCAGGGAGAGTGAGGAGATGGATGTTGTTTCACGGAAGACAAGCAGGGCTAGAAGGGGTTGGCTTAGAAGATTGCGATCAATGACGTGCATGATTGATAGGCAAGCTGAAGGTGATGATAGGAGGCAAGAACGCAGTTGCGCATTCTCCGGGTGTAGGCTCCAGAAGGTTAAGGTCAGGCAAAGCAGGAAGCAAATGAAGGAACTTTCGGCTCTTTACATGAGGCAGGATATCCAAGCACACGAAGGTTCAATTTCAACCATGAAATTCAGTCCTGATGGTCAGTATCTTGCAAGTGGTGGTGAAGATGGAGTTGTGCGCTTGTGGCAAGTGGTTGAGGAGGATAGATCTAATGAAATTGACATTTCGGAAATTGATCCATCCTGCATTTACTTTACAGTGAATAATCTCTCTGAATTGACCCCACTGTTTATGGATAAGGAAAAAATCAGCAAACTAGAGAGCATGAGAAAAACATCAGATTCAGCATGCATCATTTTTCCTCCTAAGATTTTCCGGTTGTTGGAGAAACCATTGCACGAGTTCTGCGGACATGGAGGCGAAGTTTTGGATCTCTCATGGTCAAAGAATAATTATCTTCTGTCGTCTTCTGTTGACAAGACTGTTCGACTATGGCAAGTCAATTCTGACCATTGCTTGAAAGTTTTTCCACATAGTAATTATGTGACATGCATACAATTCAATCCTGTGGATGATAATTATTTCATTAGCGGATCTATAGATGGAAAAGTGCGCATCTGGACAATTCCTGATTGTCGTGTTTTTGATTGGACTGATCTCCGAGATATGGTAACTGCAGTATGTTATCGACCTGATGGGCAGGGAGGGATTATTGGCTCCATGGCAGGCAATTGTCGGTTTTATAACATATCAGATGATCGATTGCAGTTGGATCCTCAGATATGCTTACTTGGTAAAAAGAAACTTCCTGGAAGAGGGATAACTGGCTTTCAGTTTCTTCCACAAGATTTTAACAAGGTTATGGTTACCTGTGCTGATTCACAAGTCAGAATCCTTGATGGGCATAATGTAATTGGCAAATACAAAAGCCTAAGCACAGGGAGCCCAATGTCTGCATCTTTGACTTCCGATGGGAAACATATTTTATCAGCTTGTGAGGACTCTAATGTATATCTATGGAACATTAGTCAGGAAGAGTCTGATCCCACGAAAGCCAAGAAGATTAGGTCTTGTGAGCGGTTTTTCTCAAATGCTTCTGTTGCAGTACCTTGGCATGGTCTGAAATCTCAAACTACGGAAAATGAACATCAATTGAATGTCCTGGATAAAAGATCACCACAAGCCATGCATCTCAATCCACCTGCCTCTTTCTCCCTAGGCCAAGAGTTTTACTTGGAGCCTTTTCCCAAGGGATCTGCAACTTGGCCTGAGGAGAAGCTTCCTGTCTCTAGCTCCGAGGTGAAAACATCTACGATGCATAAATCTGAATACAAGTTCTTGAAATCTTCTTGCAGGAGTACCTCCCATTCTCATGCATGGGGTATGGTCATTGTGACTGCAGGCTGGGATGGCCGGATAAAATCATTCCACAATTATGGTTTGCCTGTACCCGTTTGA 2181 0.447 MGSFSEDEECRFFDAQEDVVSIADAVSDGTGTLDTTSTSKEGVFTGFDYEVWIRSPRSVQERRSKFMKSMGLRLNRVGLENSVDVFSVEQEEVADRVGDSGGAVTRTCGFEDEFCSTQSAMSCLSTMNSSEDFGLVENMACQDENLERAVGRNSDKEGQHRRMSDGRDVGLDRLVNAGGPNDSGSTSPSFQRLESRESEEMDVVSRKTSRARRGWLRRLRSMTCMIDRQAEGDDRRQERSCAFSGCRLQKVKVRQSRKQMKELSALYMRQDIQAHEGSISTMKFSPDGQYLASGGEDGVVRLWQVVEEDRSNEIDISEIDPSCIYFTVNNLSELTPLFMDKEKISKLESMRKTSDSACIIFPPKIFRLLEKPLHEFCGHGGEVLDLSWSKNNYLLSSSVDKTVRLWQVNSDHCLKVFPHSNYVTCIQFNPVDDNYFISGSIDGKVRIWTIPDCRVFDWTDLRDMVTAVCYRPDGQGGIIGSMAGNCRFYNISDDRLQLDPQICLLGKKKLPGRGITGFQFLPQDFNKVMVTCADSQVRILDGHNVIGKYKSLSTGSPMSASLTSDGKHILSACEDSNVYLWNISQEESDPTKAKKIRSCERFFSNASVAVPWHGLKSQTTENEHQLNVLDKRSPQAMHLNPPASFSLGQEFYLEPFPKGSATWPEEKLPVSSSEVKTSTMHKSEYKFLKSSCRSTSHSHAWGMVIVTAGWDGRIKSFHNYGLPVPV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1593 726 MobiDBLite consensus disorder prediction 148 169 - -
Dod09g1593 726 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 6 726 - -
Dod09g1593 726 PANTHER WD REPEAT DOMAIN 44 6 726 IPR040324 -
Dod09g1593 726 MobiDBLite consensus disorder prediction 147 205 - -
Dod09g1593 726 Gene3D - 253 613 IPR015943 GO:0005515
Dod09g1593 726 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 416 450 - -
Dod09g1593 726 SMART WD40_4 410 449 IPR001680 GO:0005515
Dod09g1593 726 SMART WD40_4 451 490 IPR001680 GO:0005515
Dod09g1593 726 SMART WD40_4 542 582 IPR001680 GO:0005515
Dod09g1593 726 SMART WD40_4 369 407 IPR001680 GO:0005515
Dod09g1593 726 SMART WD40_4 501 541 IPR001680 GO:0005515
Dod09g1593 726 SMART WD40_4 265 304 IPR001680 GO:0005515
Dod09g1593 726 SMART WD40_4 671 718 IPR001680 GO:0005515
Dod09g1593 726 SUPERFAMILY WD40 repeat-like 267 716 IPR036322 GO:0005515
Dod09g1593 726 Pfam WD domain, G-beta repeat 413 448 IPR001680 GO:0005515
Dod09g1593 726 Pfam WD domain, G-beta repeat 273 303 IPR001680 GO:0005515
Dod09g1593 726 Pfam WD domain, G-beta repeat 371 406 IPR001680 GO:0005515
Dod09g1593 726 ProSiteProfiles Trp-Asp (WD) repeats profile. 376 416 IPR001680 GO:0005515
Dod09g1593 726 ProSiteProfiles Trp-Asp (WD) repeats profile. 416 450 IPR001680 GO:0005515
Dod09g1593 726 PRINTS G protein beta WD-40 repeat signature 291 305 IPR020472 -
Dod09g1593 726 PRINTS G protein beta WD-40 repeat signature 436 450 IPR020472 -
Dod09g1593 726 PRINTS G protein beta WD-40 repeat signature 394 408 IPR020472 -
Dod09g1593 726 ProSiteProfiles Trp-Asp (WD) repeats profile. 272 313 IPR001680 GO:0005515
Dod09g1593 726 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 272 305 - -
Dod09g1593 726 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 376 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1593 Dod-Chr9 37673357 37678079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1593 272 440 U-box Gene Family AT2G33340 22.843 1.05e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1593 - - gmx:100817209 1064.29