Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1579 ATGCTGCGCAGAATCATGGACGTTCCACCATTAGAGCCCGATTTCTTTGAGTTTGATTGGGCACCACCGTTCCCATACCAAAGCAAGCAAGTTTGCTTCAACGAGTTCCCAGAACTCGAGAACTTCAGCTTCAACGACTTCGACCTCCCACCACTGGATGAAAATTTCGTGGTGGACCAAAAGCCTCTCGGCATTGTTTTGCCTACTACTGAGAGTTTCAACAATGATCTTGGGGAGGCTTCCATGAAGATTGAAAGCAGGTCTCTAACTTGCATCAAACAAGAGACAGAGGAGCAGATTCAAGAAGTTCCATGGGGTGGATGCAGGAAGAAGAGAACGAGTGAATTGGGCTTCGATGAGATAAAGAAGCATTTTGGTGTTCCAATAACAGAAGCAGCAAAAGAAATGAACGTGGGACTGACCCTGTTGAAGAGAAGGTGCAGGGAACTCAACATCATGCGGTGGCCTCACAGAAAAATCAAGAGCCTGAAGTTACTCATCGACAATGTCAAGGAGATGGGTTTGTCAGACGAGGCTGCTATGTTGGAGGAACACCAGAAGATGTTGGAGAAACTACCGGGGATGGAACTCACCGAAGAAACCAAGAAGCTGAGGCAAGCTTGTTTTAAAGCTAATTACAAGAGGAGAAGATATTTGGCACTTCAAGCTTGA 672 0.4613 MLRRIMDVPPLEPDFFEFDWAPPFPYQSKQVCFNEFPELENFSFNDFDLPPLDENFVVDQKPLGIVLPTTESFNNDLGEASMKIESRSLTCIKQETEEQIQEVPWGGCRKKRTSELGFDEIKKHFGVPITEAAKEMNVGLTLLKRRCRELNIMRWPHRKIKSLKLLIDNVKEMGLSDEAAMLEEHQKMLEKLPGMELTEETKKLRQACFKANYKRRRYLALQA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1579 223 Pfam RWP-RK domain 116 163 IPR003035 -
Dod09g1579 223 ProSiteProfiles RWP-RK domain profile. 103 184 IPR003035 -
Dod09g1579 223 PANTHER PROTEIN RKD4 110 217 IPR044607 GO:0003700
Dod09g1579 223 PANTHER PROTEIN RKD4 110 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1579 Dod-Chr9 37588698 37589863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1579 115 220 AtRKD Transcription Factor Family AT5G53040 60.377 7.50e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Dod09g1579 RWP-RK 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1579 - - aprc:113850801 278.1