Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1573 ATGGGGAAGAAAGGAGGCAGCTGGTTCTCATCGGTGAAGAAAGTTTTCAAGTCATCTTCCAAGGACTCGCCGCTTCCACCTGAGAAGAAGAAGGAGAGCGAAGAAAAGTGGCAGCATGAAACACCAGAGGTCTTGTCTTTTGAGCATTTTCCTGCAGAGAGTTCTCCTGATATAACCAACGAGGGGAGCATCACATCAACCCCATTGAATGAAGACAGAAATCATGCCATTGCCTTTGCAGCTGCAACCGCTGCGGCCGCCGAGGCTGCGGTGGCAGCTGCTCAAGCAGCCGCTAGAGTTGTGAGATTGGCGGGCTATGAACGCCACTCTAAGGAGGAAAGGGCTGCAACACTCATTCAATCATCCTACAGAGGCTACCTTGCTCGACGGGCACTGCGTGCATTAAAGGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGACACAATGTACGCAAGCAAGCGCAGATGACAATGCGGTGCATGCAAGCATTAGTCCGAGTGCAGGCAAGAGTAAGAGCTCGCAGACTCCAGTTAACTCACGACAAGCTTCAGAGGACAGTAGAGGAGAAGCAAGAACAATTACAACAAATTAAACAACAACAACAACATCAACAGCAACAACAGCCTAAGCCTATAAGCCCTATCACAAAGTTAGACACCGATGGTTGGGACAACAGGCGCAAGAGTAGCCAGAAAATTAAGGAAAATGATTTGAGGAAACATGAAGCTTCAATGAAGAGAGAAAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAACTGCAGAAGCAATATTTGCATATGGATCCAAGTGGAAATGGTGATGACATTGGAATGTATGCCTATGCCAATGAGCATGAGAGAGCCCAATTGGATTGGAACTGGTTGGAACGTTGGATGTCATCACAGTCACAACATCATGTTAGGCCACGTGATGCCACCTACATGACTCTTGCTACTGCTGCGGCTACTACTACTACAGCTACTACCACCACTGATGACATGTCAGAAGAAAAGACTGTTGAAATGGACATGGCTGGGCCTCCGGACCCCAACATGTGCCTCATGGGCCAAGAGTACCTTGATTCAAGCCCAATATCCAAACACCACCAGCGACACCACAGTGGAGGAGGTGTACCTAGCTATATGGCCCCAACCAAGTCTGCAAAGGCTAAGGTTCGGAGTCATGGCCAACTTAATAAGCAACGGGCTTTATATGGGCCAAACTGGAACTCCTCAACTAGGAGAAGTTCCGCTGTTGTGTTGGGCTGTGACGCATCCAGCTCTGGTGGGGTCACTGCAACTTACCAGTTTCCAAAGAGCCCAAGCCCAAAGATAAATGGGATTCGCCTCCAATCTAGACGGATTTCTGGTGGCAGCCCAGACAATGTTGGCGTTGAGGATTGGGCACTTCCCCTTGGAGCCCATGATTGGACTTGA 1437 0.4934 MGKKGGSWFSSVKKVFKSSSKDSPLPPEKKKESEEKWQHETPEVLSFEHFPAESSPDITNEGSITSTPLNEDRNHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYERHSKEERAATLIQSSYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHDKLQRTVEEKQEQLQQIKQQQQHQQQQQPKPISPITKLDTDGWDNRRKSSQKIKENDLRKHEASMKRERALAYAFNCQQLQKQYLHMDPSGNGDDIGMYAYANEHERAQLDWNWLERWMSSQSQHHVRPRDATYMTLATAAATTTTATTTTDDMSEEKTVEMDMAGPPDPNMCLMGQEYLDSSPISKHHQRHHSGGGVPSYMAPTKSAKAKVRSHGQLNKQRALYGPNWNSSTRRSSAVVLGCDASSSGGVTATYQFPKSPSPKINGIRLQSRRISGGSPDNVGVEDWALPLGAHDWT* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1573 478 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Dod09g1573 478 Gene3D - 109 163 - -
Dod09g1573 478 MobiDBLite consensus disorder prediction 23 43 - -
Dod09g1573 478 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Dod09g1573 478 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Dod09g1573 478 MobiDBLite consensus disorder prediction 1 69 - -
Dod09g1573 478 PANTHER IQ-DOMAIN 21 1 451 - -
Dod09g1573 478 SMART iq_5 111 133 IPR000048 GO:0005515
Dod09g1573 478 SMART iq_5 134 155 IPR000048 GO:0005515
Dod09g1573 478 Coils Coil 173 207 - -
Dod09g1573 478 MobiDBLite consensus disorder prediction 194 242 - -
Dod09g1573 478 MobiDBLite consensus disorder prediction 220 242 - -
Dod09g1573 478 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Dod09g1573 478 Pfam Protein of unknown function (DUF4005) 364 417 IPR025064 -
Dod09g1573 478 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Dod09g1573 478 MobiDBLite consensus disorder prediction 194 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1573 Dod-Chr9 37500448 37504785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1573 1 444 IQD Protein Family AT3G49260 48.707 3.99e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1573 - - aprc:113873497 568.54