Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1562 ATGTCGGAGTATGATTTGGCAGCAGAGGGTGATCTTTTCAAAGCACCTGAACCTATTATTGAAGAGCCAGTCATGGACCTGGACCCCGTGACAGCAGCCATCTCCATGATATCTTGTGGAGAAGATGTTGTCTGCTCGCAGGGACTAAAATCCACAGATATTGATGTTCTTCAAAAGGAGCAGCTTCTGAGGGAGGTGTTCTATGAGTGTGAAAAGGATCTCTTTGAAAAGGCAGCAATAGACTTACCATTCTCTCAGATTCTGGACATCAAGGTTCCTGTTGTGAACACAGAGGAGAACACAATTGAAGAAAAGAAACAACTTCCTGACATGCCATTACCAAAGAGCATCAGTTCGGGAAGTTTGAGCTCAATGGACTGGATGCATGGGGCCACAATAAAGCCTGCTTTCCTTGATATCCCTGGAATAGATTTCGATGAAGTTTATGGCATGCGGAGATCATTAAGTGAAGGAGATATAAAGACTCTAGGCAATGGCAATTTGAACAATGTCCAGTCTCCCCATGAGAAGCCTTTTTTTGTCAGCAACTTCACCAATGAGGAACGCCGCGAAAAGCTCTCCAGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGGAAGATCAAGTATGCTTGCAGGAAGGCTCTTGCTGATAGCCAACCAAGAATCCGTGGAAGATTTGCAAAGACTGAAGAATCTGATGCTAAGAGGCAATGA 720 0.4417 MSEYDLAAEGDLFKAPEPIIEEPVMDLDPVTAAISMISCGEDVVCSQGLKSTDIDVLQKEQLLREVFYECEKDLFEKAAIDLPFSQILDIKVPVVNTEENTIEEKKQLPDMPLPKSISSGSLSSMDWMHGATIKPAFLDIPGIDFDEVYGMRRSLSEGDIKTLGNGNLNNVQSPHEKPFFVSNFTNEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDAKRQ* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1562 239 PANTHER CCT MOTIF FAMILY PROTEIN 1 237 - -
Dod09g1562 239 Pfam CCT motif 189 231 IPR010402 GO:0005515
Dod09g1562 239 ProSiteProfiles CCT domain profile. 189 231 IPR010402 GO:0005515
Dod09g1562 239 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1562 Dod-Chr9 37360563 37364636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1562 172 234 C2C2-CO-like Transcription Factor Family AT3G21880 46.032 9.36e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g1562 CCT 5.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1562 - - gmx:100814332 382.874