Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1558 ATGTCGTCGACGCTGCTGGAGGTGACACGTGCAGGGCACGAGGAGGTGGAGCGGCTGGAGCGGGCAATAGTGAAGGACCTACAGAATGAGCCAGCCTCCAACAAAGAGCGTTTGCATCAGAGTCACCGCGTTCGAAACATGATCGACACCATTACCTCCACTACGCATAAGCTTATTGAGAGATATGAGGACAACGACAATGCGAGGAAGGATGAGATTGCTGCACTCGGAGGTCAAACTGCAACTGGAATCAATGTCTTCAGTGCCTTTTACGATCGTCTCAAAGAGATACGAGAGTATCATAGGAAGCACCCGGTTGCGCGTGTTGTTGATGCTAATGATGATTATGAAGCACTCCTGAAAGAGGAACCTCAAATTGAGTTTAGTGGAGAGACAATTGATCGAACAAAAGACAATGTTGTAAAGAAGCAAGCACTGACGTATGAGGAAATTGAAGCAGAACGTGAGGAGGAAGAGACCCAAGAGGACACTGAAAGTGAAGATGAGGAGCAGCAGATATATAATCCTCTTAAATTGCCAATGGGATGGGATGGGAAGCCCATACCTTATTGGTTGTATAAGCTACATGGTCTGGGTCAGGAATTCAAGTGCGAAATATGTGGGAACTACAGTTATTGGGGGCGTCGGGCTTTTGAAAGACATTTTAAAGAATGGCGCCATCAGCATGGGATGCGGTGCCTTGGCATACCAAATACTAAGAATTTCAACGAAATCACATCCATTGAGGAAGCAAAGGAACTCTGGAAGAAGATACAGCAAAGACAAGGAGTGAACAAGTGGCGCCCAGATCTAGAAGAAGAGTACGAAGACAAAGAAGGCAACATCTACAATAAGAAGACATACACTGATTTACAGCGTCAGGGACTGATATGA 894 0.4597 MSSTLLEVTRAGHEEVERLERAIVKDLQNEPASNKERLHQSHRVRNMIDTITSTTHKLIERYEDNDNARKDEIAALGGQTATGINVFSAFYDRLKEIREYHRKHPVARVVDANDDYEALLKEEPQIEFSGETIDRTKDNVVKKQALTYEEIEAEREEEETQEDTESEDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1558 297 ProSiteProfiles Zinc finger matrin-type profile. 202 233 IPR000690 GO:0003676|GO:0005634|GO:0008270
Dod09g1558 297 PANTHER SPLICING FACTOR SF3A-RELATED 1 131 - -
Dod09g1558 297 PANTHER SPLICING FACTOR SF3A-RELATED 131 297 - -
Dod09g1558 297 Coils Coil 141 168 - -
Dod09g1558 297 MobiDBLite consensus disorder prediction 151 170 - -
Dod09g1558 297 PANTHER BNAA03G01920D PROTEIN 1 131 - -
Dod09g1558 297 PANTHER BNAA03G01920D PROTEIN 131 297 - -
Dod09g1558 297 MobiDBLite consensus disorder prediction 150 171 - -
Dod09g1558 297 Pfam Splicing factor SF3a60 binding domain 81 105 IPR021966 -
Dod09g1558 297 Pfam SF3a60/Prp9 C-terminal 178 297 IPR024598 GO:0000398|GO:0003723|GO:0005681
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1558 131 297 C2H2 Transcription Factor Family AT5G06160 86.826 4.35e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1558 K12827 - gmx:100815393 327.791