Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1545 ATGATGATGCATCATCAGCAAGACAAGTTTGTTAGATTTCAGGATTGGAATTCAGAGAAGAGCTCTGAGAGCAGCTATCCTGCACTTTATGTAACGCGCTCAGGGAGAATCAGAAATACATTAAGTTCAGTTTCAGAGAAGTTTCAAAGGGGCTTGGAATCTAGTTCAGAGAGGATAAAGAGAATTGGGAAATCATTCAAATCTTTTCCCTATAACAGTGCTTTTACTAGAAGTTTTACTTCTAGAAAGAAAATCCTTGATCCACAGGGCCCTTTCCTTCAAAAGTGGAACAAGATATTTGTATTATCTTGTCTTATTGCTGTATCACTAGATCCTTTGTTCTTCTATGTCCCTGTGATTGATGATCAGAAGAAATGTCTTTCACTGGACAGAAAAATGGAAATTACAGCAACTGTTTTGAGATCTTTCTCTGATATTTTTTATATAATCCACATAATTTTTCAATTTCGAACCGGATTCATTGCTCCATCTTCTCGAGTTTTTGGAAGAGGAGTTTTGGTTGAAGATTCTTGGGCAATAGCAGTGAGGTATCTGTCATCATACTTCTTAGTCGACATTCTTGCTGTTCTTCCCCTCCCACAGGTGGTTATCCTGATTATCATTCCAAAGATGAGAGGCTTTGAATCATTGAATACGAAGAACTTGTTGAAGTTCATTGTCATCTTCCAATATGTGCCACGGTTTTTACGAATAATTCCATTATATAAAGAGGTTACAAGGACTTCTGGCATTCTTACTGAAACAGCTTGGGCTGGAGCTGCATTCAATCTATTTCTTTACATGCTTGCAAGTCATGTTCTTGGTGCCTTTTGGTACTTGGTTTCTATAGAAAGAGAAACCACATGCTGGCAAGATGCCTGTCAAAAAAATACCAATTGTAACAAGGCATATATGTATTGTGATGATCAGCAAGGTTTGGGCACAATCTCAACATTCTTGAATGCTTCTTGCCCAATACAGAATCCAGATACAACACTCTTTAATTTTGGAATATTCCTTGATGCCCTTCAATCTGGTGTTGTGGGGTCAGAAGATTTCCCACAGAAGTTCTTTTATTGTTTTTGGTGGGGCCTCAGAAATTTGAGCTCTCTTGGGCAGAACCTGGAAACAAGTACCTATATTTGGGAAATCTGCTTTGCAATTTTCATTTCCATAGCTGGTTTGGTATTGTTTGCATTTCTCATAGGAAATATGCAGACATATTTGCAATCAACTACTACAAGATTGGAGGAGATGAGAGTGAAAAGGAGAGATGCAGAACAGTGGATGTCTCATCGATTACTCCCAGACAGCCTGAGAGAGAGAATCAGACGACATGAACAGTACAAATGGCAGGAAACCAGAGGGGTTGATGAAGACAATTTGATTTGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGTCATCTTTGCTTGGCTTTGCTTATGAGAGTGCCAATGTTTGAGAAAATGGATGAGCAACTTTTGGATGCGATGTGTGACCGTCTCAAGCCAGTGCTTTACACTGAAGAGAGTTGCATTCTAAGAGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGAGGCAAGGTATTGACGGTGACGACTAACGGTGGAAGAACAGGCTTCTTTAACTCTGAATACCTCAAGGCCGGCGACTTCTGTGGAGAGGAGCTCCTCACTTGGGCACTAGACCCTCATTCCTCATCCAACCTTCCCATCTCAACAAGGACTGTTCAAACTCTTTCAGAAGTGGAAGCCTTTGCTCTAAAGGCCGATGACTTGAAGTCTGTTGCGTCTCAGTTCCGGCGCCTTCACAGCAAGCAGCTACGGCACACTTTCAGGTTCTACTCGCAACAATGGCGCACGTGGGCTGCATGTTTCATTCAAGCTGCATGGAGGCGCTATAGTAAAAGGAAGCTTGAAGAGTCTCTCAAGGAAGAGGAGAATAGGCTGCAAGATGCATTGGCCAAGGCAGGTGGTAGCTCACCTAGCCTTGGTGCCACAATATATGCTTCTAGATTTGCTGCTAATGTTCTAAGAGCTTTGCGTAGAAATGGCACAAGGAAGACTAGGGTGCCAGACAGAATACCACCAATGCTGCTTCAGAAGCCTGCTGAACCTGACTTCACTGCTGAAGAGAGATAA 2154 0.4178 MMMHHQQDKFVRFQDWNSEKSSESSYPALYVTRSGRIRNTLSSVSEKFQRGLESSSERIKRIGKSFKSFPYNSAFTRSFTSRKKILDPQGPFLQKWNKIFVLSCLIAVSLDPLFFYVPVIDDQKKCLSLDRKMEITATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSWAIAVRYLSSYFLVDILAVLPLPQVVILIIIPKMRGFESLNTKNLLKFIVIFQYVPRFLRIIPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLVSIERETTCWQDACQKNTNCNKAYMYCDDQQGLGTISTFLNASCPIQNPDTTLFNFGIFLDALQSGVVGSEDFPQKFFYCFWWGLRNLSSLGQNLETSTYIWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDNLICNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCILREGDPVDEMLFIMRGKVLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKSVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKRKLEESLKEEENRLQDALAKAGGSSPSLGATIYASRFAANVLRALRRNGTRKTRVPDRIPPMLLQKPAEPDFTAEER* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1545 717 Coils Coil 640 660 - -
Dod09g1545 717 CDD CAP_ED 488 619 IPR000595 -
Dod09g1545 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 8 715 - -
Dod09g1545 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 715 - -
Dod09g1545 717 MobiDBLite consensus disorder prediction 693 717 - -
Dod09g1545 717 SUPERFAMILY cAMP-binding domain-like 417 610 IPR018490 -
Dod09g1545 717 Gene3D Helix hairpin bin 414 479 - -
Dod09g1545 717 SUPERFAMILY Voltage-gated potassium channels 87 410 - -
Dod09g1545 717 ProSiteProfiles IQ motif profile. 624 653 IPR000048 GO:0005515
Dod09g1545 717 Gene3D Jelly Rolls 486 606 IPR014710 -
Dod09g1545 717 SMART cnmp_10 488 619 IPR000595 -
Dod09g1545 717 Pfam Cyclic nucleotide-binding domain 509 603 IPR000595 -
Dod09g1545 717 Gene3D - 99 412 - -
Dod09g1545 717 Pfam Ion transport protein 96 415 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod09g1545 717 ProSiteProfiles cAMP/cGMP binding motif profile. 488 572 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1545 Dod-Chr9 37140125 37146464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1545 3 716 Ion Channels AT5G53130 79.248 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1545 K05391 - gmx:100817516 1283.09