Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1543 ATGATGGAGTGCAACAGGGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATGTTGGTGCAAAGAAGTTTGCCCTCAAGGCTCTGAATCTGTATCCTGCATTGGAGGATCTTTCCCAGTTTTTGACAACTCTAGATATTTATATCTCTGCTGAGAATAAAATTAGTGGAGAGATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGACGAAGAGACAGTTAGAAAGCAGTACAGGAAGCTCGCTCTCAATCTTCACCCTGACAAAAACAAGTGTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCTTGGAGTTTGCTATCAGACAAGACCAAGAGACTAGAATATAACCAGAAGAGGAGTTCAAAAGGTTTTCAGCATAATTCTCCCAGCCATGCTGGATCTCAATCAGATGCACCCAGTTCAAATGGTTTTTATAATAGGGCTGGAAATAATAATGCTCGGGCACCTTCAACTTCAGTTCCTCCTACACACAAAAGGGCTGAAACCTTTTGGACTATCTGTAACCGGTGCAGGACACATTATGAATATCTGAGGATTTATTTGAATCACACACTTTTATGTCCAAACTGTAATGAAGCTTTTGTGGCTGTGGAGAGGGGTCCGCCTCCTAATGTTTTTAAGTCACCAAATTGGTCTTCTCGTCAACAGCATCAGAATTCTCGACATCATGGTGGAAATAATAACACAAACTATCAGTGGGGTTCTGACTCCAGAATGGCTGGTTATGGTGGCAGAGATGGATCCTCATCTGTTGCTGCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTGAGGAGAGAGGGGGCACCATCAATTGCTGAATGGGAAAGGAATCAAATGTCGAAGAGGACTGATGGTTCTTATTACAAAGTGGATAAATCTATGAAGAAGAGGAAGACAGATGATTTTCGCATTAATGGTTATCAAGGATACATGGCAAATCATATGGCCACAGGTCATGGGGCAGCTGGTTTGGGTGCTGAACCAGGAAAGGCTAACTTGGAAACGGAAAGGAATTATGGTTTTTCAGGTATTACTGGCAAGCATTACAGCACGAGAGAGTTGTCAATGTTTGAGTTAAGAAACATGTTGATGGATAAGTCACGGAATGAAATTCGTAAAAAACTTCAAGAATGGAGGTCAGTGGCTGAAGCTAAAATTGCCAACAACAGAGAGAATAAGAGACAGAAAAGTGCATTTAATGACAAAATAATTAGTTCAGAGAAGCGTGGAGATGCCACTGTTAATGGTAACAGGCATATGGACATTGATTCTTTCCAAGTCCCATCTGATGATACAGTTAAGAAGAACATCTATGTAACAATCAATGTTCCGGACCCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAATTCTTTTGAGGATGACCAGGTGTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATCTCCATTAACCCATTTAGAATGCGGATAAGCTGGCTCAACTCTCGAAGCAACAGTGAATTGGGCCCCATAGATTGGATAGGTTCCGGTTTCTATAAAACTTGTGGGGACTTCAGGACTGGCAAGCATGAAATAACTGAATCACTGAATTCATTTTCCCACCCAGTTAAGTGGACTAAGGGCACGAGGGGAGTTGTTCGCATCTTTCCCGGGAAGGGGGAAGTCTGGGCTATCTATAGAAACTGGTCTGCTGATTGGAATGAACATACTCCAGACGAAGTGATACACAAGTATGATATGGTAGAGGTGCTCGAAGATTTCACTGAGGCGCAGGGTGTGGTAGTTACCCCGCTTGTTAAGGTTGCTGGTTTCAGGACTGTATTTCAAAGGCACCCTGACATTGATCAGGCGAAGAGGATTCCAAAAGAGGAGCTGTTCCGATTCTCTCATCAGGTTCCTAATTACTTGCTTACTGGCCAAGAGGCCAACAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCGGCCGCAACTCCTTTAGACCTCCTTCAGATAATCACAGAAGCTGAGGAAGCATCAGATAATGCTTAG 2109 0.432 MMECNRDEAVRAKEIAERKFSEREYVGAKKFALKALNLYPALEDLSQFLTTLDIYISAENKISGEMDWYGILGVSPFADEETVRKQYRKLALNLHPDKNKCLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSSKGFQHNSPSHAGSQSDAPSSNGFYNRAGNNNARAPSTSVPPTHKRAETFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAVERGPPPNVFKSPNWSSRQQHQNSRHHGGNNNTNYQWGSDSRMAGYGGRDGSSSVAAQAASVVQQASEKVRREGAPSIAEWERNQMSKRTDGSYYKVDKSMKKRKTDDFRINGYQGYMANHMATGHGAAGLGAEPGKANLETERNYGFSGITGKHYSTRELSMFELRNMLMDKSRNEIRKKLQEWRSVAEAKIANNRENKRQKSAFNDKIISSEKRGDATVNGNRHMDIDSFQVPSDDTVKKNIYVTINVPDPDFHNFDLDRAENSFEDDQVWAAYDDDDGMPRYYARIHKVISINPFRMRISWLNSRSNSELGPIDWIGSGFYKTCGDFRTGKHEITESLNSFSHPVKWTKGTRGVVRIFPGKGEVWAIYRNWSADWNEHTPDEVIHKYDMVEVLEDFTEAQGVVVTPLVKVAGFRTVFQRHPDIDQAKRIPKEELFRFSHQVPNYLLTGQEANNAPKGCRELDPAATPLDLLQIITEAEEASDNA* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1543 702 MobiDBLite consensus disorder prediction 129 175 - -
Dod09g1543 702 MobiDBLite consensus disorder prediction 132 175 - -
Dod09g1543 702 PANTHER BNAC03G44070D PROTEIN 2 697 - -
Dod09g1543 702 Pfam Domain of unknown function (DUF3444) 462 668 IPR024593 -
Dod09g1543 702 MobiDBLite consensus disorder prediction 225 248 - -
Dod09g1543 702 CDD DnaJ 67 120 IPR001623 -
Dod09g1543 702 Coils Coil 695 702 - -
Dod09g1543 702 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Dod09g1543 702 PANTHER HEAT SHOCK PROTEIN-LIKE 2 697 - -
Dod09g1543 702 Gene3D DnaJ domain 64 170 IPR036869 -
Dod09g1543 702 MobiDBLite consensus disorder prediction 224 248 - -
Dod09g1543 702 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Dod09g1543 702 SUPERFAMILY Chaperone J-domain 63 152 IPR036869 -
Dod09g1543 702 Pfam DnaJ domain 67 128 IPR001623 -
Dod09g1543 702 PRINTS DnaJ domain signature 69 87 IPR001623 -
Dod09g1543 702 PRINTS DnaJ domain signature 87 102 IPR001623 -
Dod09g1543 702 PRINTS DnaJ domain signature 103 123 IPR001623 -
Dod09g1543 702 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1543 Dod-Chr9 37125682 37130577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1543 5 221 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 5.97e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1543 - - gmx:100814722 1175.23