Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1533 ATGGACAACATGGGAGATCCGAAGAACCTAATACAGGAGTTAGTACAAGGTTTGGAGATGGCAAGACAGCTCCAAATCCATCTCCAAGTGCCATCATCTACCTCCCAAGAAATCCGTGAGCTTCTGATCCAGAAGATCATATCCGCATTCGAAAAGGCACTCGAGATGGTGAACTGGAAAGGGCCAGTGGGAGAGCCGTCGTCACAACATCCCTTATCTGCAGGGGCTGGAATCAGAATGTCAGATGAGTCGCCAACTCTGAGCGTCAGTCCCCGCAGCGAAGACTCTGACAAAGGAGATTTCAGCAGGGACCAAGATCAAAATGCTTCCAGGAAAAGAAAGACTTTGCCAAGATGGACAAAACAGGTTCGAGTTAACCCAGGAATGGGGGTGGAAGGGCCTCTTGATGATGGATACAGTTGGAGAAAATATGGTCAAAAAGACATTCTTGGAGCCATGTACCCAAGAGGCTATTATAGATGCACCCACAGAAATGTCCAAGGGTGCTTGGCCACAAAGCAAGTGCAAAGATCTGATGAAGATCCCACTGTCTTTGAAATCACATACAGAGGGCAGCACACATGCACAGTGGCATCCTCTTCCAATGCGGTTCCTGCAACAAGTCCAAAAGAAAACCAAGATTCCAATCTGAACACAAACCTGCAGCAGCAGCAGCAGAATGTGCTGCAAAGCCTGGATCAGCAACCCATCAATGAGCTGCTTCTGAACCTCCGTGAAGGCCTGAGGGTCCAAACAGAGAACCTAGATGCACCTGACCAACCACCCTTTGTTGGTTCCTTGTATTTCCCTTCAACTTCAAACATCAAAACTGAGAACCAGGTTTTCCCACCCCCTCATCCTATGCTCCCTGAAAACTTCACTCCTCCTTCATACGTGTCCCCTGCCACCTCAGGAATAAGCCACTTTTCGGTGTCTCCAAGTGGGGTTAACACATTCGGGGGAAACTCCAATTTGGCACGTTCTGGGTCTCAGATCAATGACATGATCTCTGCTGCTACCTCAGCTTCAAACTCACCAACCGTTGGTTTGGAGTTCCCATTTGACCACTTTGAATTTGACGGCCAGAACTTCACATTTGATAACCCACGATTTTTCTCTTAA 1122 0.4795 MDNMGDPKNLIQELVQGLEMARQLQIHLQVPSSTSQEIRELLIQKIISAFEKALEMVNWKGPVGEPSSQHPLSAGAGIRMSDESPTLSVSPRSEDSDKGDFSRDQDQNASRKRKTLPRWTKQVRVNPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRNVQGCLATKQVQRSDEDPTVFEITYRGQHTCTVASSSNAVPATSPKENQDSNLNTNLQQQQQNVLQSLDQQPINELLLNLREGLRVQTENLDAPDQPPFVGSLYFPSTSNIKTENQVFPPPHPMLPENFTPPSYVSPATSGISHFSVSPSGVNTFGGNSNLARSGSQINDMISAATSASNSPTVGLEFPFDHFEFDGQNFTFDNPRFFS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1533 373 ProSiteProfiles WRKY domain profile. 130 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1533 373 MobiDBLite consensus disorder prediction 93 113 - -
Dod09g1533 373 MobiDBLite consensus disorder prediction 65 122 - -
Dod09g1533 373 Gene3D WRKY domain 128 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1533 373 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod09g1533 373 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 371 - -
Dod09g1533 373 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 371 IPR044810 GO:0003700
Dod09g1533 373 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod09g1533 373 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1533 Dod-Chr9 36988944 36990552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1533 8 263 WRKY Transcription Factor Family AT4G23810 39.437 2.72e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod09g1533 WRKY 4.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1533 - - gmx:100776906 473.396