Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1521 ATGGACAAGAAGCCATGCCTCTTGTTCATTTTCTCAGCAGCCTTCATGATGGGAGCAATGTTCTTAAGTGTTGCAGCTGAGCCAGAGGAAGATAAACAAGCTTTGCTTGATTTCTTTCACAACATGAATCACTCTCCTAACCTCAACTGGGATGAGAACTCTTCTGTGTGTCAAAGCTGGAGAGGAGTGATTTGCAACGCTGACCAATCTCGAGTTATAGCCCTCCGATTGCCTGGAACTGGGTTGAGTGGTCCAATTCCACCCAACACCATTGGTCGCCTTTCAGCACTTCAGACTGTGAGTCTTAGATCAAATGGTATAACTGGCCCTTTCCCTGCTGATTTCTCTGAGCTGAAAAACTTGACCGGCCTCTATCTACAATTCAACAGGTTTTCTGGCCCCTTGCCATTGGATTTCTCAGTTTGGAATAATCTTACTATTGTCAATTTATCCAACAACTATTTTAATGGGAGCATCCCTTTTTCAACTGCAAATTTGACTCACCTCACTTCATTAGTCCTTGCCAACAACTCACTTTCTGGTGAAATCCCCGATCTCAATATTCCTAGCCTGCAAGAGCTGAATTTGGCCAACAATAATCTTAGTGGGTTGGTGCCTAAATCCCTTCTTAGATTTCCAAGTTGGGCCTTTGCCGGTAATAATCTTACATCTTCAAATGCACTTCCTCCAGCCATTCCCCTGCAGCCACCTAACGATGCTCAACCAACCAAGAAACACAATAGAATTAGTGAACCGACTTTGTTGGCTATCATCATTGGTGGTTGTGTGCTGGGATTTGCTGTGATTGCAGCTATCATGATTGTGTGCATGTATAAGAAAGATGGCGAAAATGTGCAACAGGTTAAGTCCCAGAAAAAAGAAGCTCCTCCGAGGAAACAATCTTCTGAAAGTCAAGTCTCTCAAGAGAAAGACAAAATTGACTTCTTTGAGGGTTGCAATCTTGCATTTGACCTAGAAGACCTACTGAGAGCTTCTGCTGAGATTCTTGGGAAGGGTACCTTCGGTACAACATATAAGGCTTCTCTAGATGATGCAACCACAGTGGTGGTGAAGAGATTGAAGGAGGTCACAGTTGGAAAACGAGACTTTGAACAACAGATGGAGGTCGTGGGGAGAATTAAGCATGAAAATGTGGATGCATCAAGGGCATACTACTATTCAAAGGACGAGAAACTTATAGTATATGATTACTATCACCATGGCAGCGTTTCTGCACTGTTGCATGGCAGAAGAGGGGAGGGAAGGACCTCTTTGGACTGGGAAAGCCGTTTGAGGATTGCAATTGGTGCAGCAAGAGGCATTGCTCACATCCATGCTCAACATGGAGGGAAACTGGTTCATGGAAACATAAAAGCCGCAAACATCTTCCTCAACTCACAAGGGTATGGTTGTGTATCCGACATCGGATTGGCAACCTTGATGAGTCCAATCCCCCCACCATCAACACGTGCAGCAGGATACCGTGCCCCGGAAGTGACGGACACCCGCAGAGCAACCCATGCATCTGATGTCTACAGTTTTGGGGTCCTGTTACTTGAGCTTCTAACTGGGAAATCCCCCATACATGCCACAGGAGGTGAGGAGGTTGTCCACTTGGTAAGATGGGTGAATTCTGTGGTTAGAGAAGAGTGGACCGCAGAGGTGTTTGATGTAGAGCTGTTGAGGTTTCCGAATATAGAGGAAGAAATGGTAGAGATGCTACAGATAGGGATGGCTTGTGCAGCAAGAATACCAGATCAGAGACCAAAAATGCCAGATGTGGTGAGAATGGTGGAGGATATTCGTCGCGTAAATACTGGGAACCCATCATCCACTGAGTCTAGATCAGAAGTTTCGACTCCAACCCCTTATGCAATTGGGATGCTTTCTACCTCTGTTCCAGAATGA 1908 0.4539 MDKKPCLLFIFSAAFMMGAMFLSVAAEPEEDKQALLDFFHNMNHSPNLNWDENSSVCQSWRGVICNADQSRVIALRLPGTGLSGPIPPNTIGRLSALQTVSLRSNGITGPFPADFSELKNLTGLYLQFNRFSGPLPLDFSVWNNLTIVNLSNNYFNGSIPFSTANLTHLTSLVLANNSLSGEIPDLNIPSLQELNLANNNLSGLVPKSLLRFPSWAFAGNNLTSSNALPPAIPLQPPNDAQPTKKHNRISEPTLLAIIIGGCVLGFAVIAAIMIVCMYKKDGENVQQVKSQKKEAPPRKQSSESQVSQEKDKIDFFEGCNLAFDLEDLLRASAEILGKGTFGTTYKASLDDATTVVVKRLKEVTVGKRDFEQQMEVVGRIKHENVDASRAYYYSKDEKLIVYDYYHHGSVSALLHGRRGEGRTSLDWESRLRIAIGAARGIAHIHAQHGGKLVHGNIKAANIFLNSQGYGCVSDIGLATLMSPIPPPSTRAAGYRAPEVTDTRRATHASDVYSFGVLLLELLTGKSPIHATGGEEVVHLVRWVNSVVREEWTAEVFDVELLRFPNIEEEMVEMLQIGMACAARIPDQRPKMPDVVRMVEDIRRVNTGNPSSTESRSEVSTPTPYAIGMLSTSVPE* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1521 635 Gene3D Phosphorylase Kinase; domain 1 297 404 - -
Dod09g1521 635 Pfam Leucine Rich Repeat 190 210 IPR001611 GO:0005515
Dod09g1521 635 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Dod09g1521 635 SUPERFAMILY Protein kinase-like (PK-like) 334 598 IPR011009 -
Dod09g1521 635 PANTHER LRR RECEPTOR-LIKE KINASE 15 628 - -
Dod09g1521 635 ProSiteProfiles Protein kinase domain profile. 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1521 635 Gene3D Ribonuclease Inhibitor 28 235 IPR032675 -
Dod09g1521 635 SUPERFAMILY L domain-like 45 214 - -
Dod09g1521 635 ProSitePatterns Protein kinases ATP-binding region signature. 336 367 IPR017441 GO:0005524
Dod09g1521 635 Gene3D Transferase(Phosphotransferase) domain 1 406 620 - -
Dod09g1521 635 PANTHER OS05G0588300 PROTEIN 15 628 - -
Dod09g1521 635 MobiDBLite consensus disorder prediction 604 635 - -
Dod09g1521 635 ProSiteProfiles Leucine-rich repeat profile. 190 211 IPR001611 GO:0005515
Dod09g1521 635 MobiDBLite consensus disorder prediction 603 635 - -
Dod09g1521 635 Pfam Protein tyrosine and serine/threonine kinase 334 596 IPR001245 GO:0004672|GO:0006468
Dod09g1521 635 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1521 Dod-Chr9 36841648 36845643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1521 26 622 Receptor kinase-like Gene Family AT4G23740 57.929 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod09g1521 PK_Tyr_Ser-Thr 8.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1521 - - gmx:100813065 981.089