Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1514 ATGTCAAACAATGCATTAACTCTTTTTATCTTGTTTCTTATTATCACCTTGCTTCCATCCTCCTCTGCTCTGAACCAGGAAGGTCTCTCTCTGCTTTCATGGCTTTCAACCTTCAACTCCTCTGACTCTGCCACTGCCTTCTCTTCATGGAATCCAACCCACGAAACTCCTTGCAGATGGGATCATATAACGTGTTCCAAAGAAGGGTTTGTTTCAGAGATCAGAATAACATACATAGATCTTCATAGCAGCTTCCCTACACAGTTCCTTTCTTTTGGCCACCTTACCACTCTTATCATCTCCAATGGAAATCTCACAGGTGAGATTCCAAGTTCATTGGGAAACTTGTCCTCTCTGGTTACCTTGGACCTTAGCTTCAATACTCTATCAGGAACCATTCCTGCAGAGATAGGAAAGCTATATAAACTGCGGTGGTTATTGTTGAACTCGAATGCCTTGCATGGAGGAATTCCAACCACAATAGGAAACTGTTCAAGGCTTCAGGAGCTGGCACTGTTTGACAACCAGCTCTCTGGTTTTATTCCTGGAGAAATAGGCCGGTTGGTGGCTCTCGAAACAATTCGAGCAGGAGGAAATCCAGGTATCCATGGAGAAATTCCAATGCAGATATCAAACTGCAAGGCCCTTGTTTTTCTTGGACTAGCAGATACTGGTGTTTCTGGGCAGATTCCACCAACTATAGGAGAACTTACCAATCTCAAGACACTTTCAGTCTACACAGCACATCTCACAGGTCACATCCCACCAGAGATTCATAACTGCTCAGCCTTGGAGAATTTGTTTCTATATGAAAACCAGCTTTCTGGGAATATCCCTGATGAGCTGGGTTCCATGCAAAGCCTCAGGAAGGTGCTGCTGTGGCAGAACAATTTGACTGGCAACATTCCTGATAGTCTGGGAAACTGTACAGGTCTGAAGGTTATAGATTTCTCTTTGAATTCTCTGGCCGGTCAGTTACCTATGACTCTCAGTAGCCTACTCTCATTAGAGGAGCTTCTTTTGTCTGATAATAACATTTCTGGAGAAATACCTGCCTATATTGGCAACTTTTCCAGGCTGAAGCAACTTGAATTGGATAACAACAAATTCACTGGGCAGATTCCACCTGTCGTGGGGCAACTGAAGGAACTCACACTCTTCTTTGCCTGGCAAAATCAACTCTACGGAAGCATACCAGCAGAACTTTCCAACTGTGAGAAACTTGAAGCAGTTGACCTCTCACACAATTTCCTCACTGGTTCGATTCCGAGTTCGCTCTTTCATCTGGAGAATTTAACTCAGTTGCTGCTGATATCAAACAGACTTTCAGGTCGAATTCCACCAGATATTGGCAGTTGCACTAGTTTGATCCGGTTACGGATGGGGTCAAACAATTTTACTGGTCAAGTTCCACCAGAAATAGGCCTTTTAAGCAGTCTGAGTTTTCTCGAGTTGTCAGATAATCAACTCAGTGGAGATATTCCCTCTGAGATAGGTAACTGTGCTAATCTAGAAATGCTTGACTTGCACAAAAATGAGCTGCAAGGAACAATTCCTTCCTCAATAGAATTCCTAGTTAGTCTCAATGTCTTGGACCTTTCTGCAAACAGAATAGCGGGAAGCATTCCTGGAAAATTGGGCAAGCTTAAATCCCTAAATAAGTTGATTCTAAGTGGAAACCATATCACTGGTTTGATCCCTCAGTCACTTGGCTTTTGCATGAATTTGCAGTTGCTGGATATCAGTAGCAACATGATCACTGGTTCGATTCCCGATGAGATTGGTTACTTGCAAGGATTAGATATCCTCTTGAACTTGAGTTGGAATTCTCTAACAGGCCCCATTCCAGAGACTTTCTCAAATCTCACAAAGCTCTCCACAATGGACCTCTCTCACAACAAGCTCACAGGCACCCTCAAAGTGCTTGGTAGCCTTGAAAATCTGGTGTCTCTCAATGTCTCCTACAATAGACTCTCCGGTTCTCTTCCTGATACAAAGTTCTTCCATGATCTACCTGCTGCTGCATTTGCTGGTAACCCTGAGCTTTGCATTAACAGGTGTCATGCAACTGGAAATCGCCAAGGCATCAAGTCAACAAGGAATATCATTATCTACACTTTCCTTGGGGTTATTTTAACTTCTATTTTTGTAACTGTGGGAGTAATATTAGCTCTCAGAATTCAAGGGGCTACTTTTGGGACAAATTTTGAGGAAGGTGGTGAACTGGAATGGGCTTTCACTCCGTTCCAAAAGCTCAACTTCTCCATCAATGATATTGTCACAAGGTTAACAGATTCCAACATTGTGGGAAAGGGTTGCTCGGGAGTTGTTTATCGTGTGGAGACTCCAATGAGACAGGTCATTGCAGTGAAGAAGCTATGGCCAATAAAGAATGATGAGCCACCAGAGAGAGACCTCTTTTCTGCAGAAGTTCAGACCCTTGGATCAATAAGGCACAAAAATATAGTGAGACTTTTAGGATGCTGTGACAATGGAAGAACCAGATTGCTCTTGTTTGATTATATATGTAATGGGAGTTTGTTTGGATTGCTCCATGAAAAGAGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATTCTGGGAACAGCCCAAGGTTTAGAATATCTTCATCATGATTGTATCCCTCCAATTGTCCATAGGGATATTAAGGCTAACAACATCTTGGTAGGTCCACAATTTGAAGCTTTTCTTGCAGATTTTGGCCTTGCAAAACTTGTCAATTCCACAGAGTGTTCAGGAGCCTCTAATATAGTTGCAGGTTCTTATGGATACATAGCACCTGAATATGGATACAGTTTGAGGATCACAGAGAAGAGTGATGTGTACAGTTATGGTGTTGTGCTCCTTGAGGTCTTAACTGGGATGGAGCCAACTGATAACAGGATTCCGGAGGGTGTACACATTGTCACCTGGGTTAGCAGTGAAATCAGAGAGAAGAAAAGAGAATTCACATCCATCCTTGACCAGCACCTAATACTGCAGTGTGGAACAAGAATCCCAGAGATGCTTCAAGTGCTAGGGGTGGCTTTTCTCTGTGTGAATCCATCCCCAGAAGAAAGGCCTGCAATGAAGGATGTAACAGCAATGCTCAAGGAGATCAGGCATGAAAATGACGATTTTGAGAAACCGAACTTCCTCCAGAAAGGCATGGTTACCAATCCAAAAGCAGCAGTTCACTGCTCAAGTTTCTCCAGATCATGTGAACCTCTAATAGAATCACCATCTTCTTCTTCACAGTCATCAAAATGA 3273 0.429 MSNNALTLFILFLIITLLPSSSALNQEGLSLLSWLSTFNSSDSATAFSSWNPTHETPCRWDHITCSKEGFVSEIRITYIDLHSSFPTQFLSFGHLTTLIISNGNLTGEIPSSLGNLSSLVTLDLSFNTLSGTIPAEIGKLYKLRWLLLNSNALHGGIPTTIGNCSRLQELALFDNQLSGFIPGEIGRLVALETIRAGGNPGIHGEIPMQISNCKALVFLGLADTGVSGQIPPTIGELTNLKTLSVYTAHLTGHIPPEIHNCSALENLFLYENQLSGNIPDELGSMQSLRKVLLWQNNLTGNIPDSLGNCTGLKVIDFSLNSLAGQLPMTLSSLLSLEELLLSDNNISGEIPAYIGNFSRLKQLELDNNKFTGQIPPVVGQLKELTLFFAWQNQLYGSIPAELSNCEKLEAVDLSHNFLTGSIPSSLFHLENLTQLLLISNRLSGRIPPDIGSCTSLIRLRMGSNNFTGQVPPEIGLLSSLSFLELSDNQLSGDIPSEIGNCANLEMLDLHKNELQGTIPSSIEFLVSLNVLDLSANRIAGSIPGKLGKLKSLNKLILSGNHITGLIPQSLGFCMNLQLLDISSNMITGSIPDEIGYLQGLDILLNLSWNSLTGPIPETFSNLTKLSTMDLSHNKLTGTLKVLGSLENLVSLNVSYNRLSGSLPDTKFFHDLPAAAFAGNPELCINRCHATGNRQGIKSTRNIIIYTFLGVILTSIFVTVGVILALRIQGATFGTNFEEGGELEWAFTPFQKLNFSINDIVTRLTDSNIVGKGCSGVVYRVETPMRQVIAVKKLWPIKNDEPPERDLFSAEVQTLGSIRHKNIVRLLGCCDNGRTRLLLFDYICNGSLFGLLHEKRLFLDWDARYKIILGTAQGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFLADFGLAKLVNSTECSGASNIVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEVLTGMEPTDNRIPEGVHIVTWVSSEIREKKREFTSILDQHLILQCGTRIPEMLQVLGVAFLCVNPSPEERPAMKDVTAMLKEIRHENDDFEKPNFLQKGMVTNPKAAVHCSSFSRSCEPLIESPSSSSQSSK* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1514 1090 SMART LRR_typ_2 645 678 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 525 548 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 429 453 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 116 140 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 549 572 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 477 501 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 333 357 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 622 644 IPR003591 -
Dod09g1514 1090 SMART LRR_typ_2 285 309 IPR003591 -
Dod09g1514 1090 Gene3D Ribonuclease Inhibitor 325 420 IPR032675 -
Dod09g1514 1090 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Dod09g1514 1090 Gene3D Transferase(Phosphotransferase) domain 1 842 1060 - -
Dod09g1514 1090 PRINTS Leucine-rich repeat signature 622 635 - -
Dod09g1514 1090 PRINTS Leucine-rich repeat signature 119 132 - -
Dod09g1514 1090 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Dod09g1514 1090 Pfam Leucine Rich Repeat 548 573 IPR001611 GO:0005515
Dod09g1514 1090 Pfam Protein kinase domain 765 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1514 1090 Gene3D Phosphorylase Kinase; domain 1 739 841 - -
Dod09g1514 1090 ProSitePatterns Protein kinases ATP-binding region signature. 769 797 IPR017441 GO:0005524
Dod09g1514 1090 Gene3D Ribonuclease Inhibitor 421 695 IPR032675 -
Dod09g1514 1090 ProSiteProfiles Protein kinase domain profile. 763 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1514 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Dod09g1514 1090 SMART serkin_6 763 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1514 1090 PANTHER LRR RECEPTOR-LIKE KINASE 3 1059 - -
Dod09g1514 1090 SUPERFAMILY L domain-like 72 394 - -
Dod09g1514 1090 SUPERFAMILY RNI-like 331 663 - -
Dod09g1514 1090 SUPERFAMILY Protein kinase-like (PK-like) 751 1047 IPR011009 -
Dod09g1514 1090 Gene3D Ribonuclease Inhibitor 217 324 IPR032675 -
Dod09g1514 1090 Gene3D Ribonuclease Inhibitor 23 201 IPR032675 -
Dod09g1514 1090 Pfam Leucine rich repeat 604 658 IPR001611 GO:0005515
Dod09g1514 1090 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Dod09g1514 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1514 Dod-Chr9 36754130 36758801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1514 23 1076 Receptor kinase-like Gene Family AT5G56040 47.232 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod09g1514 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1514 - - gmx:100807225 1785