Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1491 ATGGTACCTCCAGGGCCACCCACTCCCATTGGTGGCGGTCAGTCTGTGACACCCTCTCTTTTGAGATCAAATTCAGGAATGTTAGGAGCTCAAGGGGGCCCCATGCCTTCACAGTCTTCTTTCCCTTCACTTGTGTCGCCACGTACTCAGTTCAACAATATGAACATTCTAGGAAATATGCCCAATGTAACATCCATGCTGAATCAGTCTTTCCCAAATGGAGTTACGAACCCCGGGCTCTCTGGTCCGGGAAGTAGCCAGCGTGGAGTTGTGGATACTGGAGCCGAAACGGATCCACTCTCCAGTGTTGGCAATGGAATGAGCTTCAGTAATGCTGCATCCTCATTTGTACAATCAAATATGGTGAATGCTGGTTCTTCTGGTCCAGGTCAGGGTCAACAGTTTTCTAACCCTTCTGGCAACCAACTGTTACCGGATCAACAGCATTCCCAACAGATGGAGCCTCAAAATTTTCAACATAATCAGCAGCCAATGCAACAGTTCTCTGCTCCTCTGAATACACAGCAGCAACAGCAGCAGCATTTTCAATCAATTCGTGGAGGGATAGGTGGTATGGGACCAGTAAAGTTGGAGCCCCAGGTAAGCAACGACCAACTTGGTCAGCAGCAGCAGCAGCAGTTGCAATCATTGAGGAATCTCACTCCGGTGAAATTGGAACCGCAGCAAATTCAAACGAGAACTCTGCAACAAGTAAAAATGGAGCCCCAGCATTCTGATCAACCATTATTTTTGCATCACCAACAACAGCAGCAGCAGCAGCAACAGCAGCAACAACAGCTACAACAACAGCAGCATCTCCTTCACATGAGGCAATCTTCTCAAGCTGCTGCTGCTCAGATGAATCAGATGAATCTTTTGCATCAGCATAGGTTTTTGCAATTACAACAACAACACCAGCAGCAACAACTCTTGAAAGCAATGCCTCAACAACGGCCCCAACTACCACAGCAATTTCAACAGCAGAATATGCCTCTAAGGCCTCCTGTGAAGCCAGCATATGAACCTGGGATGTGTGCCAGGCGACTGACACATTACATGTATCAGCAACAGCATAGACCTGAAGTTAGTCAGCTAGGAGCAGTTGCTCAAAAATACCAGGCTTTTACTCAAAATTCAACACCAAATGTATCTGCGCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCGTCAGCCCGTCAGTTGGCTAAAGCCTTAGAAGTTCCATTGGTAAATGATTTAGGATACACGAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAAGGACTGGACCCATGGAGAGCTTAGCCAAATTCCCTCGGAGAACAAGTGGTTCATCTGGAATTCATAATCAAGCACAACAACATGAAGATCAATTACAGCAGCAGCAGCAACAGCAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCAGTGCAAGCTGCTACCATTCAGATTGCTTCTAGCAATGGTATGGTCAGTGTGAATAACAATGTCAACTCAGCATCTGCATCAACGACCACAAGCACTATTGTTGGACTTCTCCACCAGAACTCAATGAATTCTAGACAACAAAGTTCAATGAACAATTCAAGCAGTCCATATGGAAGCAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTACTGTTCCACAGGCCCAACCAAACTCATCCCCTTTTCAGTCACCAACACCATCTTCATCTAACAACCCCCCGCAAACATCTCATCCTGCCTTAACATCTGCCAATCACATGAATACAGCAAACTCATCTGCTAATATGTCCTTGCAACATCAGCAATCGCCTCTTTCTGGTGAAGCTGACCCTGGTGATGCTCAGAGCTCAATGCAGAAAATAATCCATGACATGATGATGTCCTCCCAGATTAATGGTACTTGTGGAATGGTAGGCGCTGGTTCTCTAGGGAGTGACGTGAAAAACGTAAATGGTATTCTGCCGGTGAGTGCCAATACGGGGCTTAACAGTGCCAATGGCCTGGTGGGCAACGGCGCAATGAACAGCAATTCCGGTGTTGGCATTGGTAGTTATGGCACAATTGGTCTCGGTCAATCTGGCATGCCTAATGGGATGAGAACTGCTATGGGAAATAATTCTGCCCTGAATGGAAGGGGAGGAATGGCATCTATTGCTCGTGATCAAGCCATGAATCATCAGCAGGATTTGTCAAACCAACTACTTAGCGGCCTGGGAGCAGTAAATGGTTTTAATAATATTCAATTTGATTGGAAACCATCTCCATAA 2313 0.4574 MVPPGPPTPIGGGQSVTPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRTQFNNMNILGNMPNVTSMLNQSFPNGVTNPGLSGPGSSQRGVVDTGAETDPLSSVGNGMSFSNAASSFVQSNMVNAGSSGPGQGQQFSNPSGNQLLPDQQHSQQMEPQNFQHNQQPMQQFSAPLNTQQQQQQHFQSIRGGIGGMGPVKLEPQVSNDQLGQQQQQQLQSLRNLTPVKLEPQQIQTRTLQQVKMEPQHSDQPLFLHHQQQQQQQQQQQQQLQQQQHLLHMRQSSQAAAAQMNQMNLLHQHRFLQLQQQHQQQQLLKAMPQQRPQLPQQFQQQNMPLRPPVKPAYEPGMCARRLTHYMYQQQHRPEVSQLGAVAQKYQAFTQNSTPNVSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMESLAKFPRRTSGSSGIHNQAQQHEDQLQQQQQQQMVAHNSNGDQNSVQAATIQIASSNGMVSVNNNVNSASASTTTSTIVGLLHQNSMNSRQQSSMNNSSSPYGSSSVQIPSPGSSSTVPQAQPNSSPFQSPTPSSSNNPPQTSHPALTSANHMNTANSSANMSLQHQQSPLSGEADPGDAQSSMQKIIHDMMMSSQINGTCGMVGAGSLGSDVKNVNGILPVSANTGLNSANGLVGNGAMNSNSGVGIGSYGTIGLGQSGMPNGMRTAMGNNSALNGRGGMASIARDQAMNHQQDLSNQLLSGLGAVNGFNNIQFDWKPSP* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1491 770 MobiDBLite consensus disorder prediction 446 494 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 170 214 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 537 631 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 455 494 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 1 47 - -
Dod09g1491 770 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 361 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 68 106 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 170 185 - -
Dod09g1491 770 Coils Coil 461 481 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 251 277 - -
Dod09g1491 770 PANTHER LIM DOMAIN-BINDING PROTEIN 360 769 IPR029005 -
Dod09g1491 770 PANTHER LIM DOMAIN-BINDING PROTEIN 1 361 IPR029005 -
Dod09g1491 770 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 360 769 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 120 157 - -
Dod09g1491 770 Coils Coil 253 273 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 537 628 - -
Dod09g1491 770 MobiDBLite consensus disorder prediction 12 47 - -
Dod09g1491 770 Pfam LIM-domain binding protein 366 451 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1491 Dod-Chr9 36555248 36562062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1491 344 766 C2H2 Transcription Factor Family AT1G43850 50.658 6.08e-74 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1491 - - gmx:100799771 603.594