Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1488 ATGGAGGACTCTTCTGCTGGGGAAGACACCAAGACTTGTCCCCGCGGTCACTGGAGACCCGCTGAGGATGAGAAGCTCCGCCAACTTGTTGAACAATATGGTGCTCAGAACTGGAATTCCATTGCTGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTCAATCAGCTTGACCCGAGAATTAACAGAAGGCCATTCACAGAAGAGGAAGAAGAGAGGCTACTAGCGGCACACCGCATTCACGGGAACAAGTGGGCGCTCATAGCAAGGCTCTTCCCTGGTCGAACAGATAATGCTGTGAAGAATCATTGGCATGTTATAATGGCAAGGAAGCAAAGGGAACAGTCTAAGTTATGTGGCAAGAGAAGTTTCCAAGAATTCTACAACGATTCCAACACGTCCTCCTCCAACAACAACAACAACAACAACAACTTCCCGCAAAAGAGACCAAAATCTCATCATCAAGACCTGTTATTCGGCTCATCAAGAATTGGGTTAGAGAGTGCCAGATTCTTTGACTTTCGGAGCCTTGACAATAAAGATAGGATCATAGTTGCAGATACTCCCTCTAGGTCCCTTGCCTCCTGGAATTTTGCATCTGTTCCAACAACAACCACCACAAACAGTTCTTCTTTCAATAGCCCCTTCTCTAATGTTTATCTCCCAGAATGTTCCAAAAGCTCAGATAGGTTTCTCTGCAGAGTTTATCCGAGTCCTGCAGTACCCTTTGGTACCTTTAGCGGTTCCACTAACGCGTTCTCGCTCCAAAACTACAAGAGGGTTGTTCCAAGTCCTTTTGTGTTCCTCGGTTCTTCTGATGATGGAAGGGTAAAGAGGGAATTGATGACTGGTTTCCGTGATAATAACTCATCCACATTCACAAAGTTGAGGGCTAGTTCTACGGAGAAGGAGCAAGCAGATGAGCCTAATGTTGAGCACAAAGAAGTTCCTTTCATTGATTTTCTTGGTGTGGGTGTCTCTTCATCATAA 1002 0.4551 MEDSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQEFYNDSNTSSSNNNNNNNNFPQKRPKSHHQDLLFGSSRIGLESARFFDFRSLDNKDRIIVADTPSRSLASWNFASVPTTTTTNSSSFNSPFSNVYLPECSKSSDRFLCRVYPSPAVPFGTFSGSTNAFSLQNYKRVVPSPFVFLGSSDDGRVKRELMTGFRDNNSSTFTKLRASSTEKEQADEPNVEHKEVPFIDFLGVGVSSS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1488 333 MobiDBLite consensus disorder prediction 133 152 - -
Dod09g1488 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dod09g1488 333 ProSiteProfiles Myb-like domain profile. 15 61 IPR001005 -
Dod09g1488 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dod09g1488 333 PANTHER TRANSCRIPTION FACTOR MYB56 6 331 - -
Dod09g1488 333 MobiDBLite consensus disorder prediction 133 157 - -
Dod09g1488 333 Pfam Myb-like DNA-binding domain 18 78 - -
Dod09g1488 333 Gene3D - 15 66 - -
Dod09g1488 333 Gene3D - 69 158 - -
Dod09g1488 333 PANTHER MYB PROTEIN-RELATED 6 331 - -
Dod09g1488 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 61 IPR017930 -
Dod09g1488 333 SUPERFAMILY Homeodomain-like 14 108 IPR009057 -
Dod09g1488 333 MobiDBLite consensus disorder prediction 1 21 - -
Dod09g1488 333 CDD SANT 18 59 IPR001005 -
Dod09g1488 333 SMART sant 14 63 IPR001005 -
Dod09g1488 333 SMART sant 66 114 IPR001005 -
Dod09g1488 333 CDD SANT 69 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1488 Dod-Chr9 36502485 36504554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1488 13 122 MYB Transcription Factor Family AT1G17950 84.545 2.67e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod09g1488 Myb_DNA-bind_6 2.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1488 K09422 - gmx:100817328 437.187