Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1478 ATGCTGCTTCCCGCCCTGTTTCCGTGCCCCGAATATCCTGAAGCATATTTCTCGGGATTGTCCCAGGCTAACACAGTTCACAGTGAGCCAAAGATGACTAGTGTTGTTGTTTTGGACAGAGGAAGATCGAGCTTTGCAAGAGTTTTCATTGGAGTACAGATATTGCACATGGAGAGCCCTCCTCCTGCTCCATCATCATCACCTGCTGCTGCTGCTTCTTCTTCTTCTTACGTGATGGTTGCATGTGATGCCACCAAGGACCGCGGTGACAACGAGATGAAGCAAGTCCTTGATAACATTAGAAAAAAGGGTGTCTTTCTCAATGCTGGTGACAGGTTGCTCGTGTTCTGCGTTTTGCATAAGGTGCTTCACCCCATGGGGTACCAGACAATAGCATCCCCCGAGTCTTTGGTTGGCACCAGCTTTCGAGCAATGGAGGAAGAAGTTAAAAAGAAAGTTGACTCATATGCAAATGAGCTTTTATCATATCAAGAAGAATTTAAAAATGCAGGGGTTATCGTTGAAGTTAAAGTCACCGCAGGTTTTCCAATTAGACAGGTTATTTTACAAGAGGTTACAAAATATAATGTATCTTGGATTATACTTGATAGGTACCTTCGGCGCGATATGAGATTCTACGTTAACAAGATACCATGCAAGGTTGCAGTGGTTAAAGATGACTTCTCTGTGGAAATCTGGAGATCTCATCATACAAATGGCACAAATGTCGCGGAAACAAAGCCTTTCTATTCTTTTTACAAGTTTGTCTCGCTATCAGATTGCCATAGTATTGAAGATATTGAGCAGCAGTCTAGTATCTCTTTCAAAACTTTACCCCATTCAATAGCTTCTTATGATACCTCTGCCATTATTAAGAGCTATACAAAGCCTTCAAATGCTAACAAGCCAAGAGAGCACAGTTCATCAGGATCTGGATCTTCTAAGCAAGAAAGATCAGGCATAAGCAGCAAAGGAGAACTTAAGCATACCATTAGCTCTCAGATTGGTCAAAAGCAATGTAGCTTTCCACCAAAATCTTCAGATGCACCAATTCTTTGTTCTGACTGTGGAACAAAGACTGAGTTGTCCATCAAGGAGTCTATGAGCTTTAGCTATTCTGACATACAGCAAGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGATATGGTCGCGTTTACAAGGGTGTGCTTAAAGATGGACAGCAAATTGCTGCAAAGATAAGGAAAGAGGAAAGCACTCAAGGGTTTTCTGAATTTTATTCTGAGGTGTATGTCTTAAGCTTTGCTCGACACAAGAACATAGTGATGCTGTTGGGCTTCTGTTGCAAGGAAAAGCAAAATATTCTTATATATGAATATATCTGCAATAAGTCTCTAGGTTGGCATTTATTTGATAAAGATGCACCTCTTCTTGAGTGGCAACAAAGGTATGATATTGCAATTGGGACTGCAAAGGGATTGCGTTTTTTGCATGAGGAATGCCGTGGAGGTCCTATTGTTCACCGGGACATGCGACCATGCAATATACTTCTCACTCATGATTTTGTTCCCATGTGGATCTTTTGGTGCTCAAGTAACAGAGGATGGGTGTTTTCAATTGAGTGA 1617 0.4137 MLLPALFPCPEYPEAYFSGLSQANTVHSEPKMTSVVVLDRGRSSFARVFIGVQILHMESPPPAPSSSPAAAASSSSYVMVACDATKDRGDNEMKQVLDNIRKKGVFLNAGDRLLVFCVLHKVLHPMGYQTIASPESLVGTSFRAMEEEVKKKVDSYANELLSYQEEFKNAGVIVEVKVTAGFPIRQVILQEVTKYNVSWIILDRYLRRDMRFYVNKIPCKVAVVKDDFSVEIWRSHHTNGTNVAETKPFYSFYKFVSLSDCHSIEDIEQQSSISFKTLPHSIASYDTSAIIKSYTKPSNANKPREHSSSGSGSSKQERSGISSKGELKHTISSQIGQKQCSFPPKSSDAPILCSDCGTKTELSIKESMSFSYSDIQQATNDFSKDNLLGEGGYGRVYKGVLKDGQQIAAKIRKEESTQGFSEFYSEVYVLSFARHKNIVMLLGFCCKEKQNILIYEYICNKSLGWHLFDKDAPLLEWQQRYDIAIGTAKGLRFLHEECRGGPIVHRDMRPCNILLTHDFVPMWIFWCSSNRGWVFSIE* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1478 538 Gene3D HUPs 78 226 IPR014729 -
Dod09g1478 538 ProSitePatterns Tyrosine protein kinases specific active-site signature. 503 515 IPR008266 GO:0004672|GO:0006468
Dod09g1478 538 Coils Coil 146 166 - -
Dod09g1478 538 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Dod09g1478 538 Gene3D Transferase(Phosphotransferase) domain 1 459 529 - -
Dod09g1478 538 Gene3D Phosphorylase Kinase; domain 1 352 457 - -
Dod09g1478 538 ProSiteProfiles Protein kinase domain profile. 382 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1478 538 SUPERFAMILY Protein kinase-like (PK-like) 364 521 IPR011009 -
Dod09g1478 538 PANTHER OS01G0253100 PROTEIN 75 522 IPR045271 GO:0004714|GO:0006468
Dod09g1478 538 PANTHER RECEPTOR-LIKE KINASE 75 522 - -
Dod09g1478 538 MobiDBLite consensus disorder prediction 295 328 - -
Dod09g1478 538 Pfam Protein tyrosine and serine/threonine kinase 385 518 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1478 Dod-Chr9 36375031 36382353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1478 370 519 Trihelix Transcription Factor Family AT1G23540 46.667 7.02e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod09g1478 PK_Tyr_Ser-Thr 2.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1478 - - vun:114163670 657.907