Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1460 ATGCCTCCTCGTAGATGCTCGGCTTCCGCAGCGAGGGACCTTTCGGACATGGAGAGCGACGAGTACGACGACGACGAGGAGGAGCAGCTCGTGCTGAGGTGCCTCTCCTGCGAGGAAGACTTCGACCCGGACGACGTGGGAACCTGCAGGGAGTGCTACGAGGAGGCCAACGACACCGAGGACGAGCTCAGGCGCCAGATCGACGAGCTCAAGTCCAAGGTTTCCTTCCTCAAGCTTGTGTCCCCGGCAGACCCCTCGTTCCCTTCTAACCCCAATGCTCCTGCCGCTGACGTTGTCCTTGTTCCCTCCGGTGACGTGTCTGCTCCCCCTGATGCATGTGTCCCTGCCCACAGGACTGTCCTGATTAGTCGCTCTCCAGTTTTCAAAGCAATGCTCGAGAACGATATGGAGGAAAGCCGGACTGGCACCATCAAGATCACTGATGTGACATATGATGTTCTTTGTGCCTTTGTCAACTACTTATACACTGCTGAAGCATGCCTTACTGATCAACTGGCCTGCAACCTGTTGGTTCTAGGAGAAAAGTATCAGGTGAAGCATCTGAAGGGATATTGTGAGAGGTTCTTGATTTCAAGATTGAACTGGGAGAAATCTGTTGCAAGCTATGCCTTTGCATATCACCACAATGCCAAGCAATTGCAAGATGCATCCATGGAAGTGATCATGGAGAACATGGCGATGCTCTGCAAGAATGAGGCATATGCGGAGCTGGTGGAAAGCGACCCGCATCTTGTTGTGGTAATGTATGAAACTTACATTGGCAGACGGGCCAACACTGGAGCTGCCATTACTAATCTTTTAGGAGGATAG 831 0.5247 MPPRRCSASAARDLSDMESDEYDDDEEEQLVLRCLSCEEDFDPDDVGTCRECYEEANDTEDELRRQIDELKSKVSFLKLVSPADPSFPSNPNAPAADVVLVPSGDVSAPPDACVPAHRTVLISRSPVFKAMLENDMEESRTGTIKITDVTYDVLCAFVNYLYTAEACLTDQLACNLLVLGEKYQVKHLKGYCERFLISRLNWEKSVASYAFAYHHNAKQLQDASMEVIMENMAMLCKNEAYAELVESDPHLVVVMYETYIGRRANTGAAITNLLGG* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1460 276 Coils Coil 49 80 - -
Dod09g1460 276 MobiDBLite consensus disorder prediction 1 25 - -
Dod09g1460 276 Pfam BTB/POZ domain 113 198 IPR000210 GO:0005515
Dod09g1460 276 PANTHER SPECKLE-TYPE POZ PROTEIN 31 271 - -
Dod09g1460 276 PANTHER GH01369P 31 271 - -
Dod09g1460 276 Gene3D - 201 266 - -
Dod09g1460 276 Gene3D Potassium Channel Kv1.1; Chain A 55 200 IPR011333 -
Dod09g1460 276 ProSiteProfiles BTB domain profile. 96 170 IPR000210 GO:0005515
Dod09g1460 276 SMART BTB_4 96 200 IPR000210 GO:0005515
Dod09g1460 276 SUPERFAMILY POZ domain 96 198 IPR011333 -
Dod09g1460 276 CDD BTB_POZ_ZBTB_KLHL-like 96 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1460 Dod-Chr9 35942495 35945699 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod09g1460 BTB 5.7e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1460 K10523 - gmx:100794118 325.094