Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1453 ATGGGGTGTGTGTGCGTAGAAATCGCGAATGGAGATGGGAAAACGTCGCTGCTTTCGCTTGTCAAGGCCTTTGATCCCGTTCTTGCTGTTTACGAAGGAGTCTGCAATCTGAAACAGGTGGATCTCAAGCTCAAAATTTGCCGTGGTTCATCGGTGAGGAAGATTTTGGTTCGGGAAGCAAATGCTTACGCTGCAACTCATGTTGTTTTGGGAACTGCTCATGGCCACCACAGAATCCGGTCAGCTACCAGTGTGGCTAAGTACTGTGCTAAGAACTTGCCCAAGGACTGCTCTGTTCTAGCTGTTCACAATGGGAAAGTTGTGTTCAGGCGTGAAAGCTCGCCGGGGCCGGCAACTACGGCTGCCGCCGACTTCAAAGGGGTTGATCGTCATAACAGAAATGGTTTGCTTGGCTCAATTCACTGGGCACTTAGTAAGAGTACAAAAGTACTAAGTGATGACAATGAAGTGACGGGTGCTGATCATAAGAGTACTGGCCAATTTTCAGATCACAGTTTAGCTAAGATTTTGATGGATACTAAAGAAGTTGTTAGAAAAGAAAGTTGCTCAATTTGTGGTCCGATACCTGCATTACCAGATTCTTCTTGCCAGCAATCTGCAGAAGACTCTTGTTCTGGTGATGGTGTTAGTGATAATTCTTTGGCTATAGTGCTTGTTCAGAAAAATGATGCAGGACAACCTGAATTGAAACCAGGTTGGCCACTGCTACACCAGAGAATTTTATCAGACAGCCAGTTTCCTGACAGATCAATGGCGCGCCGGATCTCTGTGGTCCAGTGGGCAATGAGATTGCCCCGTAGAAATCTTCCACATGCGGCAGAACAAGATCATAAACCAAACAACTGTGATCAAGTTCGAAGCCAATCCGTGGCTTTGGATAGTGAAACTGGTGCTATTGTTCCAGTAGATTCTGAAATGAGGATAGTTTCTTCACCTGAACGCAATTCTAGAAGCATTCCTATTGAATTGGCGGGCCTTCATGAGAAATACTCATCAACTTGCAGATTGTTTGAGTACCAAGAACTTGTATTAGCAACTTCAAATTTCTTGCCTGATAACTTGATTGGGAAAGGAGGAAGTAGTAAGGTTTATAGAGGATGCCTTCCTGATGGAAAGGAACTTGCTGTTAAGATCCTAAAGCCTTCTGATGATGTTCTAAAGGAGTTTCTTTTGGAGATAGAAATTATCACTACCTTGCATCATAAAAACATTATATCACTTCTTGGGTTCTGCTTTGAGAATGGCAATCTACTTCTGGTTTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGGAGCAAGAAAAATCCTCTTGCGTTTGGTTGGACTGAGAGATATAAGGTAGCAAAGGGTGTTGCTGAGGCTTTGGAGTACCTGCATTGTGAAGATGAACAACCTGTGATCCATCGGGATGTAAAGTCATCAAATGTACTATTATCTGAGGATTTTGAACCCAAGCTCTCTGATTTTGGACTTGCTAAATGGGCATCAACTTCAGCATCACAGATAACCTGCACAGATGTTGCTGGAACCTTTGGTTACTTGGCTCCTGAATACTTCATGTACGGCAAAGTACATGATAAGATAGATGTCTATGCATTTGGTGTTGTGCTCCTTGAGCTTCTTTCGGGGAGAAAGCCTATAAGTGGTGATTATCCAAAAGGTCAAGAGAGTCTCATTATGTGGGCAAGTCCAATTTTAAATAGTGGAAAAGTGTTACAACTGTTAGATCCCACTTTGGGTGATACCTATGATCGTGAGGAGATGGAAAGAATGGTCTTGGCCGCCACACTTTGTGTCAGACGTGCTCCAAGAGCTAGACCTCAGATGAGCCTTATTTCTAAGCTCCTTCATGGTGATGCTGATGCGATCAAGTGGGCAAGGTTAGAAGTTAATGCTACAGAAGCACCAGATATGCTTGAAGATGAGGCGTGTCCACCACCACCAAGTAATCTACAGTCACATCTTAATCTTGCACTGCTTGGTGTGGAGGATGACTCACTCTCCATGTGCAGTGTTGATCAGCAGCAGAATGTCTCTTTGGAGGACTACCTGAGAGGCAGGTGGAGCCGCTCAGCAAGCTTTGACTGA 2121 0.4413 MGCVCVEIANGDGKTSLLSLVKAFDPVLAVYEGVCNLKQVDLKLKICRGSSVRKILVREANAYAATHVVLGTAHGHHRIRSATSVAKYCAKNLPKDCSVLAVHNGKVVFRRESSPGPATTAAADFKGVDRHNRNGLLGSIHWALSKSTKVLSDDNEVTGADHKSTGQFSDHSLAKILMDTKEVVRKESCSICGPIPALPDSSCQQSAEDSCSGDGVSDNSLAIVLVQKNDAGQPELKPGWPLLHQRILSDSQFPDRSMARRISVVQWAMRLPRRNLPHAAEQDHKPNNCDQVRSQSVALDSETGAIVPVDSEMRIVSSPERNSRSIPIELAGLHEKYSSTCRLFEYQELVLATSNFLPDNLIGKGGSSKVYRGCLPDGKELAVKILKPSDDVLKEFLLEIEIITTLHHKNIISLLGFCFENGNLLLVYDFLSRGSLEENLHGSKKNPLAFGWTERYKVAKGVAEALEYLHCEDEQPVIHRDVKSSNVLLSEDFEPKLSDFGLAKWASTSASQITCTDVAGTFGYLAPEYFMYGKVHDKIDVYAFGVVLLELLSGRKPISGDYPKGQESLIMWASPILNSGKVLQLLDPTLGDTYDREEMERMVLAATLCVRRAPRARPQMSLISKLLHGDADAIKWARLEVNATEAPDMLEDEACPPPPSNLQSHLNLALLGVEDDSLSMCSVDQQQNVSLEDYLRGRWSRSASFD* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1453 706 Pfam Protein kinase domain 360 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1453 706 PANTHER OS08G0249100 PROTEIN 7 687 - -
Dod09g1453 706 SMART serkin_6 356 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g1453 706 CDD STKc_IRAK 362 621 - -
Dod09g1453 706 Gene3D HUPs 16 104 IPR014729 -
Dod09g1453 706 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Dod09g1453 706 PANTHER - 7 687 - -
Dod09g1453 706 SUPERFAMILY Protein kinase-like (PK-like) 337 625 IPR011009 -
Dod09g1453 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Dod09g1453 706 Gene3D Transferase(Phosphotransferase) domain 1 431 642 - -
Dod09g1453 706 Gene3D Phosphorylase Kinase; domain 1 322 430 - -
Dod09g1453 706 ProSiteProfiles Protein kinase domain profile. 356 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1453 Dod-Chr9 35899322 35902363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1453 308 626 Trihelix Transcription Factor Family AT1G68690 42.470 1.13e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod09g1453 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1453 - - aprc:113846853 1034.25