Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1451 ATGGCGCCTGGCATTGATTTAGGAGAGAAGCATCTATCACTACGTAATGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGTATTGCAGCTCTGCTTGCTGACCAGATTGATGAAACAAACTGCACCTGGACATGCAAGGACAGCAACGATAAAGCCTTTGCTGATTGTGCTATCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAATTGGGATTATCAGATGCCTCAGGTGAAGAAGATGCTTATGAAGGTTCCAAAAATTATAAGGAATTGGAATATCAACTGCCATTGGTTTCTCAGGAGTCAACTTTTACTCGTATTCTTACCAATGAGTTTATGCATCGCAGCCCTAAAACGCAGACTATTGATGAGATAATGGTCTGCCATTGCAAACTACCTCAAGAAGGCAAGTTGGGCTGTGGTGATGAATGTCTAAACCGTATGCTTAACATCGAATGCGTGCAAGGAACCTGCCCATGTGGGGACCATTGTTCCAATCAGCAGTTCCAGAAACGCAAGTATGCCAACCTGAAGTGGTTTAAATGTGGGAAAAAGGGTTATGGACTGAAGGCACTTGACGACATAGCTAAAGGGCAGTTTCTTATTGAATATGTCGGAGAGGTGCTTGATATGCATGCTTATGAGGCAAGGCAAAGGGAGTATGCTTTGAAGGGTCATAGACATTTCTACTTTATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGTGCCAAAGGAAACTTGGGTCGATTCATTAATCATAGTTGTGATCCCAATTGTCGAACAGAAAAGTGGATGGTGAATGGGGAGATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGCAGGATGAAGAAGTGACGTTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCAAAAAAATGCTACTGTGGTTCACTTAATTGTCGAGGTTATATAGGTGTTGGTGATCCACTTAATGATGACCTGATAGTTCAAGGTGATTCAGATGAAGAATTTCCTGAACCTGTGATGCTTACTGATGATGGTGAAATTGAAGACAGTGTGCCTATACCCAAGTACTTAGATAATATTGATAGACAGTCTGCTAGGCATTTGTTGAAAGACAGGGATGTATCGGACAAACCTACAATTGCTATAGATTCAGGTGGTACACTGGAGAAAGAGAGTTCTATGAAGCATGCCTCAGCTGTTTCGCTGTTGCAGAGCTCTGAGGATGACTCAAAGGGTAAGTTACCATCTGTTCAAGTTGAAGAAATTTTTCAACAAGTGGAGGATGCAACAAGCAAAACCGTGGCTGCTGTACAACAAGGATATGCAATGGAATCAGATCTTACAGACAAAACTTCCTCCATTCAAAGAGGAGAGATGACTTCTTTACATGCTACTGTCAGTGAAGTGTTTCTGAATTCTACTTATAGTTATAGGGAATCCAAGTCTGAAATAGTTGAAGGCAGGCATGATTTTTCACAATCACATCTGCCTATTAAGACTCCTCAGCTGATTGGTTCTGTTAAAAAGGGAAAGGTACGTCCTAATCTTCCAAATGGCCTCAAAATTGAGGCAACTGTCAACCGATTGCCGGTGTCATCTGGCAAACTGAAAAAAGTAGTGGAAGGTTCTTCCAATGGCAGGTTTGAAGCAGTTCAGGAGAAACTTAGTGAGTTGCTGGATGGAGATGGAGGAATAAGCAAAAGAAAAGATGCTACCAAAGGCTACTTGAAGCTTTTGCTTCTCACTGTGGCATCAGGTGACAGGAGCAATGGTGAAGCCATTCAAAGCAATCGAGATCTTTCCATGATCCTTGATGCCCTTCTGAAAACAAAATCAAGAGCAGTGTTGAATGATATAATTAACAAAAATGGTTTGCAGATGTTACATAAGATAATGAAGCAGTACAGACAAGACTTCAAGAAAATTCCAATACTACGAAAGCTTCTTAAGGTCTTAGAATATCTGGCTGCAAGCAAGATATTGACGCTTGAACACATCAATGGTGGTCCCCCATGTCATGGAATGGAGAGCTTTCGGGAATCAATGTTGTCTCTGACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCCTAGACCCGTGAGAAAACATGGATACATGGACAGGGATGACAACAGGGTAGAATCTCACAGAATTTTCAACTGTAGCAGATATTCATCATCACACAATCATAGGCATGAGCAGGATTTAAGACCAACAGAAGCAATTGATTGTGTTCAGCAGTCGGTGCGTGTGACAACTTCAGTAGAAGCTGGTACCCCAGAGAGCTGCACTGCACTGTCTCTTGATGGGGTTGAAATCAAAAGGGAAAGAAAACGTAAAAGCCGATGGGATCAACCAGGAGAGATAAATTCATTTTCTCATGCAGTTATTGGCTCTATTACTGAAAGCCAGAATATTCATGAGGATGTTCCACCAGGGTTTTCATGTCCAGTAGGTTCAGTAAATGCTCCATTTAAGCCTGGTGATCATGCTTTGCAAAATGCGAGCCGTTCTGGATTTACCTCTGATTTAGTTGTCGGTCATCCGAAGGAGAAATTTAACTCTCGCGTACCTGTCTCATATGGAATGCCATGGTCTGTCGTCAAGCAATATGGAACACCTCATGCTGAAATTGTAGGGAGTTGGGTCACTGCACCTGGCATGCCTTTCAACCCATTTCCTCCACTACCCCCATATCTGCGGGATGAAAAAGCCTGTCAGCCTTCTAACACTACTAATGCTATGGTAATTGATCAACCTGCTGAAGTCAAACAGTGGGATACCGGTGGCCTAGTTAATTGTTGCTCAGATGATATGTCTCGCAGCGCAGCTAGAGTTAACCCTGAAGACTTGAATCTTGCTTGTGAGGACAATAAGAACACTCCTAAGCGATTGAAGGATGACTCCTATGATTTGGGAAGAAGGTACTTTAGGCAGCAGAAATGGAATAATTCAAAAATAGAGCGACCATGGTTCCGGAGGAGTGCATGGAAATGCAATGGGAACGACCCCGGTGGTGATATGTGCAGTATAGGTGTAGGAAATGTACCAAAAGAGTCAGAAGTAACATGTTCAGAGGATGCAATTTGTAGAGATGAGAAAGGTGGCAATAATATTTAG 3156 0.4252 MAPGIDLGEKHLSLRNAWVRCDDCHKWRRIAALLADQIDETNCTWTCKDSNDKAFADCAIPQEKSNAEINAELGLSDASGEEDAYEGSKNYKELEYQLPLVSQESTFTRILTNEFMHRSPKTQTIDEIMVCHCKLPQEGKLGCGDECLNRMLNIECVQGTCPCGDHCSNQQFQKRKYANLKWFKCGKKGYGLKALDDIAKGQFLIEYVGEVLDMHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSLNCRGYIGVGDPLNDDLIVQGDSDEEFPEPVMLTDDGEIEDSVPIPKYLDNIDRQSARHLLKDRDVSDKPTIAIDSGGTLEKESSMKHASAVSLLQSSEDDSKGKLPSVQVEEIFQQVEDATSKTVAAVQQGYAMESDLTDKTSSIQRGEMTSLHATVSEVFLNSTYSYRESKSEIVEGRHDFSQSHLPIKTPQLIGSVKKGKVRPNLPNGLKIEATVNRLPVSSGKLKKVVEGSSNGRFEAVQEKLSELLDGDGGISKRKDATKGYLKLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHKIMKQYRQDFKKIPILRKLLKVLEYLAASKILTLEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRPVRKHGYMDRDDNRVESHRIFNCSRYSSSHNHRHEQDLRPTEAIDCVQQSVRVTTSVEAGTPESCTALSLDGVEIKRERKRKSRWDQPGEINSFSHAVIGSITESQNIHEDVPPGFSCPVGSVNAPFKPGDHALQNASRSGFTSDLVVGHPKEKFNSRVPVSYGMPWSVVKQYGTPHAEIVGSWVTAPGMPFNPFPPLPPYLRDEKACQPSNTTNAMVIDQPAEVKQWDTGGLVNCCSDDMSRSAARVNPEDLNLACEDNKNTPKRLKDDSYDLGRRYFRQQKWNNSKIERPWFRRSAWKCNGNDPGGDMCSIGVGNVPKESEVTCSEDAICRDEKGGNNI* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1451 1051 Pfam SET domain 189 295 IPR001214 GO:0005515
Dod09g1451 1051 ProSiteProfiles SET domain profile. 178 295 IPR001214 GO:0005515
Dod09g1451 1051 Pfam AWS domain 141 175 IPR006560 GO:0005634|GO:0018024
Dod09g1451 1051 ProSiteProfiles Post-SET domain profile. 303 319 IPR003616 -
Dod09g1451 1051 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 7 978 - -
Dod09g1451 1051 PANTHER SET DOMAIN PROTEINS 7 978 - -
Dod09g1451 1051 CDD SET_SETD2 177 319 IPR044437 GO:0010452|GO:0046975
Dod09g1451 1051 Pfam CW-type Zinc Finger 18 64 IPR011124 GO:0008270
Dod09g1451 1051 ProSiteProfiles Zinc finger CW-type profile. 12 66 IPR011124 GO:0008270
Dod09g1451 1051 SMART shorttest3 126 177 IPR006560 GO:0005634|GO:0018024
Dod09g1451 1051 Gene3D SET domain 91 319 IPR046341 -
Dod09g1451 1051 SUPERFAMILY SET domain 107 316 IPR046341 -
Dod09g1451 1051 SMART set_7 178 301 IPR001214 GO:0005515
Dod09g1451 1051 SMART PostSET_3 303 319 IPR003616 -
Dod09g1451 1051 Gene3D - 15 75 - -
Dod09g1451 1051 ProSiteProfiles AWS domain profile. 126 176 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1451 Dod-Chr9 35871627 35881336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1451 161 318 C2H2 Transcription Factor Family AT2G23740 33.714 6.21e-21 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod09g1451 SET 6.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1451 - - gmx:100778307 1617.44