Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1432 ATGTCAACCCAGAATCGTCGTTCATCGTTTTCTTCTTCGACCACATCGTCTTTGGCGAAGCGCCATGCATCTGCGTCTTCCTCCGACAACAACAACGTGGGAAAGGTTTTAGGCGTTCCTCCGTCGCACTTGGCTAAGAAGCGAGCACCTCTCACTAACCTCACCAATCACATAGCTCCCAGCAGCAACGCATCACAACACTCCTCCTCTTTGGTGCCATGTGTATCTAAAGTTGCCAAGACCAAGAAAGAGGCTCCATCCTGCATCAGCAGCAGCACTACTAGCTCTGCAATTTCAAGCAATAAGATACCCATTTTGCAGAATGTCAAAACTACTAATGCAGTTGTTTTTCCTAAGGCTACTTATGCCCCAGTAAGGAATGATGCTGCTGCTGCTGCTGCTCCAAAAGTTGTTGCTGCTGCTGTTACTGTTCCAGTTCCAGTTCCAGTTCCAAGCAGCATCATGGATGTCTCTCCCAGCAAATCGGATGGGGTGTCAGTTTCTATGTCTGTGGATGAGACAATGTCTTCTTCTTGCGATTCTTTTAAGAGCCCTGACATTGAATATTTGGACAACAGTGAACTCTCGGCGGTGGATTCGATTGAGAGAAAGACGTTCAGCAACCTCAACATTTCTGATAACGCAGAGCCAGCAGGCAACATATGTAGTAGAGACATACTTGTTGAGTTGGAGAAAGAGGACAAAATTGTGAATGTCGATAATAATTACATGGATCCGCAGCTTTGTGCAACATTTGCTTGTGATATCTACAAGCACCTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGACAGAATTCAAAAGGACATAAATCCCAGTATGCGTGCTATCTTGATTGACTGGCTTGTGGAGGTGGCTGAAGAGTATCGACTTGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGTGATGAACAGGCAAAAATTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTACATAACTGATAACACATATTTCAAAGAAGAGGTTTTGCAAATGGAATCCGCTGTCTTGAATTATCTGAAGTTCGAAATGACAGCCCCAACAATTAAGTGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGGAGTCAATGAGACCCCTTCGCTGCAACTAGAGTGCTTGACAAACTATATTGCCGAGTTGTCTCTGTTGGAGTACAGCATGCTTTGTTATGCTCCATCACTAATAGCAGCTTCTGCAATTTTTCTAGCCAACTTTATTCTTTCCCCTTCAACGAAACCATGGAATGCCACGTTGAAACATTACACACTATACCAGCCTTCTGATTTGTGTAGTTGTGTAAAGGATCTCCATCGTCTTTGCTGCAACAGTCCTAACTCTAATTTGCCAGCAATTAGGGAGAAATACGGTCAGCACAAGTACAAATATGTGGCCAAGAAGTACTGCCCTCCCTCAATACCACCAGAATATTTCCAGAATTGA 1554 0.4382 MSTQNRRSSFSSSTTSSLAKRHASASSSDNNNVGKVLGVPPSHLAKKRAPLTNLTNHIAPSSNASQHSSSLVPCVSKVAKTKKEAPSCISSSTTSSAISSNKIPILQNVKTTNAVVFPKATYAPVRNDAAAAAAPKVVAAAVTVPVPVPVPSSIMDVSPSKSDGVSVSMSVDETMSSSCDSFKSPDIEYLDNSELSAVDSIERKTFSNLNISDNAEPAGNICSRDILVELEKEDKIVNVDNNYMDPQLCATFACDIYKHLRASEAKKRPSTDFMDRIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQKLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVRAAQGVNETPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLANFILSPSTKPWNATLKHYTLYQPSDLCSCVKDLHRLCCNSPNSNLPAIREKYGQHKYKYVAKKYCPPSIPPEYFQN* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1432 517 MobiDBLite consensus disorder prediction 1 40 - -
Dod09g1432 517 MobiDBLite consensus disorder prediction 1 35 - -
Dod09g1432 517 Pfam Cyclin, N-terminal domain 255 381 IPR006671 -
Dod09g1432 517 CDD CYCLIN 382 475 IPR013763 -
Dod09g1432 517 PANTHER CYCLIN-A1-1 35 516 - -
Dod09g1432 517 SUPERFAMILY Cyclin-like 245 381 IPR036915 -
Dod09g1432 517 PANTHER CYCLINS 35 516 IPR039361 -
Dod09g1432 517 PIRSF Cyclin_A_B_D_E 3 513 IPR039361 -
Dod09g1432 517 Gene3D - 255 503 - -
Dod09g1432 517 ProSitePatterns Cyclins signature. 286 317 IPR006671 -
Dod09g1432 517 CDD CYCLIN 285 374 IPR013763 -
Dod09g1432 517 Pfam Cyclin, C-terminal domain 384 503 IPR004367 -
Dod09g1432 517 SMART cyclin_7 291 375 IPR013763 -
Dod09g1432 517 SMART cyclin_7 388 476 IPR013763 -
Dod09g1432 517 SMART Cyclin_C_2 384 507 IPR004367 -
Dod09g1432 517 Gene3D - 269 382 - -
Dod09g1432 517 SUPERFAMILY Cyclin-like 384 509 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1432 Dod-Chr9 35731635 35736315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1432 4 517 Core Cell Cycle Gene Families AT1G44110 59.884 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1432 K06627 - gmx:100789565 732.25